KEGG   Desulfovibrio sp. G11: CNY67_04840
Entry
CNY67_04840       CDS       T05183                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
def  Desulfovibrio sp. G11
Pathway
def00740  Riboflavin metabolism
def01100  Metabolic pathways
def01110  Biosynthesis of secondary metabolites
def01240  Biosynthesis of cofactors
def02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:def00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CNY67_04840 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CNY67_04840 (ribD)
Enzymes [BR:def01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CNY67_04840 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CNY67_04840 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ATD80808
UniProt: A0A807ZHH9
Position
complement(1066674..1067831)
AA seq 385 aa
MSELDYTPFMREAIALAQQGRWKTCPNPMVGAVLVRDGHIVARGWHRAFGLDHAEVDCLN
DAAAQGVDPSECTLVVTLEPCCHQGKTPPCTDAVLRAGIKKIVVGLSDPNPEACGGACRL
RESGLDVIEGVCADACRDLVADFLVWQQAQRPYVILKMAATLDGRIATRKGESQWISSEE
SRQEVQRLRAGIGRCGGAVLVGGGTFRADDPRLTVRPINDGEPLGPQPLACVLTSRLPQP
DADFYLLKERPQQTVFLASPAAAASTTAKALRDMGVRVLSLGPSLRGGPDLTHMLRTMRE
ELDCPYLLCEGGGHLALSLLEAGVVDEFRLHMAPMILGDADAQPLFSGRAPLSLDEALRM
RVTGSHISGGDIHIELRPLQAVEEK
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgtctgaactggattacaccccctttatgcgcgaagccatcgcgctggcacaacagggc
cgctggaagacctgccccaacccgatggtgggggctgttcttgtgcgcgatggacacatt
gtcgccaggggctggcatcgcgccttcgggctggaccatgccgaggtggactgccttaat
gacgctgccgcgcaaggagtcgacccttctgagtgtacgctggttgtcacgcttgaaccg
tgctgccatcagggcaaaactcccccctgcaccgatgccgtgctgcgggcaggcataaaa
aaaatcgtggtggggctgtccgaccccaatcccgaagcctgcggcggcgcatgccggctg
cgcgaatccggcctggatgtcattgagggcgtctgcgcagatgcctgccgtgaccttgtg
gcagattttcttgtctggcagcaggcacagcgcccctacgtgattcttaaaatggccgcc
acacttgatgggcgtatagccacgcgcaagggcgagtcgcagtggatcagttcggaagaa
tcccggcaggaagtacagcgcctcagggccggcataggccgctgcggcggcgctgtactt
gtgggcgggggcacgttcagggctgacgatccgcggcttaccgtgcggcccatcaatgat
ggcgagcctctcggcccgcagcccctggcctgcgtgctcacctcacgcctgccccagccg
gatgccgatttttacctgctcaaagagcggccccagcagaccgtatttctggcctcgcct
gctgcggcggcctccaccacagccaaggccctgcgcgacatgggagtgcgcgttctttca
ctggggccgagcctgcgcggcgggccggacctgacccatatgctgcgcacaatgcgtgaa
gagctggattgcccctatctgctgtgcgaaggcggcgggcatctggccctcagccttctt
gaggctggcgttgtggacgaattccgcctgcatatggccccgatgattctgggagacgcg
gacgcgcaaccgcttttttccggccgtgcccccctcagcctggacgaagccctgcgcatg
cgcgtgacaggcagccacatcagcgggggcgacatccatattgagctgcgcccgctgcaa
gccgtggaagaaaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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