KEGG   Desulfovibrio sp. G11: CNY67_04935
Entry
CNY67_04935       CDS       T05183                                 
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
def  Desulfovibrio sp. G11
Brite
KEGG Orthology (KO) [BR:def00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:def03009]
    CNY67_04935
Enzymes [BR:def01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     CNY67_04935
Ribosome biogenesis [BR:def03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CNY67_04935
SSDB
Motif
Pfam: PseudoU_synth_2 CoaE AAA_33 AAA_28 nSTAND3 AAA_18 AAA_17 AAA_29 AAA_16 ABC_tran MeaB AAA_22 AAA_25 DAP3 S4_2 NTPase_1 KTI12
Other DBs
NCBI-ProteinID: ATD80826
UniProt: A0A807ZJR0
Position
complement(1085929..1087506)
AA seq 525 aa
MSRLQLKITAGQAGKRLDRILGATVPELSRAALQKVVQAGCCTVDGLPEKRPAAKMRMGQ
TVTLDLPEHPDRLQPEEGHLELLWQDDHLVVCNKPAGLTVHPCPSCPEQTLVQRLLGRFP
QLSRLEGQRPGIVHRLDKDTSGLLVVALTEADCLALAAAFAERQVHKEYLALVSGLPPLE
GQCREPLGRHPTAKIKMAVVPEDQGGRNAFTEWRRLWNTDDGSVSLLAVRIHTGRTHQIR
VHMTHLGYPLLGDRLYAPKAVQNMAPRQMLHAWRLGFTHPASGEDMRFTCPPPHDMPDAA
LAAMQRMQRLVITGNPGSGKSTLSASLAALGVPVISADDVVADLYAPGGAGSQWIGRLRG
GLLGADGAVSRSALMAAMREDPVLRRDVEQTVHALTQQRIADFWQQHENAGIPLAAAEIP
LYFECGWQHVFRPVPLSVGVHCPLPLRSARTAEHRGWNQEKMAALEEWQWPEDRKMGACD
MVITNEDDLPRLQEKAAGLVEKLRLLEQEKKEEQARTLGRIWSSD
NT seq 1578 nt   +upstreamnt  +downstreamnt
gtgagcaggctgcaactgaaaataacagccgggcaagcgggcaagcgccttgaccgcata
ctgggtgccacggttccggaactttcacgggcagccctgcaaaaggtcgtgcaggccggt
tgctgtaccgtggacggactgccggaaaaacgccccgcagccaaaatgcgcatggggcag
accgtgactctggacttgccggaacatccggaccgccttcagcccgaagaagggcatctg
gaactgctctggcaggatgatcaccttgtggtctgcaacaaacccgcggggcttacggtt
catccgtgcccgtcctgcccggaacagacgctggtgcagcgccttctggggcgctttccg
caactgtccagacttgaagggcagcgacccggcattgtgcaccgcctggacaaggatacc
agcggccttcttgtagtcgcccttacagaagccgactgcctggctctggctgcagctttt
gccgagcgccaggttcacaaggaatatctggcccttgtaagcggcctgccgccgcttgaa
ggccagtgccgtgagccgttggggcggcaccccacagccaaaataaaaatggccgtggtc
ccggaagaccagggcggcagaaatgcgttcacagaatggcgcagactctggaacacggac
gacggcagcgtatcgctgctggccgtgcgcattcatacagggcgtacccatcagatacgg
gtgcatatgacacatctggggtaccccctgctaggcgacagactttacgctcccaaagct
gtgcagaacatggctccccgccagatgctgcacgcatggcggctgggtttcacccaccct
gcaagcggcgaagacatgcgttttacctgcccgccgccgcacgacatgccggatgccgct
ctggccgccatgcagcgaatgcagcggctggtaatcacgggcaatccgggcagcggcaaa
tcgacgctgtcggccagcctggccgcgctgggtgtgcctgtcatcagcgccgatgacgtg
gtggcagatctttacgctccgggaggcgcgggcagccagtggatcggccggctgcgcggc
ggcctgcttggggccgacggcgctgtgagcagaagcgccctcatggccgccatgcgggaa
gaccccgttctccgtcgtgatgtggaacagacggttcacgccctgacacagcaacgcatc
gctgacttctggcagcagcatgaaaatgcaggaatccccttggccgccgccgaaattccg
ctttatttcgagtgcggttggcagcatgttttcaggcctgtaccgctcagcgtgggcgta
cattgccccctgcccctacgcagcgcgcgcacggcagaacaccggggctggaatcaggaa
aaaatggccgccctcgaggaatggcaatggcctgaagaccgcaaaatgggcgcctgtgat
atggtaatcaccaatgaagacgacctgccccgacttcaggaaaaagccgctggtctggtt
gaaaaattgcgccttcttgaacaggaaaaaaaggaagaacaagcccgcacactgggcagg
atctggagttcggactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system