KEGG   Dehalococcoides mccartyi GT: DehalGT_0703
Entry
DehalGT_0703      CDS       T01182                                 
Name
(GenBank) protein of unknown function UPF0027
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
deg  Dehalococcoides mccartyi GT
Brite
KEGG Orthology (KO) [BR:deg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:deg03016]
    DehalGT_0703
Enzymes [BR:deg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     DehalGT_0703
Transfer RNA biogenesis [BR:deg03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    DehalGT_0703
 Prokaryotic type
   tRNA splicing ligases
    DehalGT_0703
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: ADC74069
Position
667541..669001
AA seq 486 aa
MTSPWHGILKKIDDYRWEIPQSYKVGMRVPGLVYASERMLNQIWEEHAIEQIANVAFLPG
IMGRSMAMPDIHWGYGFPIGGVAATRISDGVISPGGVGFDINCGTRLLRTNLSVEEVQPK
IDELLNELFSKIPSGVGSSGNIKLSGTDIDNVMTRGGSWALEKGMGEAEDIKLTEESGSL
SGANPDKVSNKAKTRGASQLGTLGSGNHFLEVQVVDEIFDPEVAAVFGVQALGQVLFLIH
TGSRGLGHQVCTDYVQLLNEAVKKYGINLPDRQLACAPLKSDDGQNYLAAMACAANYAWA
NRQCITHWARDAFMKVFEKGRLDLGMDQIYDVAHNIAKIEEHMVDGKVQNVCVHRKGATR
SFPAGRPEIPAVYRKVGQPVIIPGDMGRYSYVAVGTETAMRETFGSTCHGAGRILSRGAA
KKTTSGTQLLDTLRSQGISIRVGDIGSLAEEASEAYKDVADVVEVTHKAGIARNIFKTRP
LGVIKG
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgaccagcccgtggcatggaatacttaaaaaaatagatgactaccgttgggaaatcccc
cagagctacaaagtaggtatgagagtgcccggtctggtatatgccagtgaacgtatgctc
aatcaaatatgggaggagcatgctatagagcaaattgccaatgtggcttttttgcccggt
attatgggcaggtctatggctatgcctgatattcattggggttacggtttccccatcggc
ggagtggccgctaccagaataagtgacggggtaatctcacccggcggcgtaggttttgat
ataaactgcggaacccgccttttaaggacaaacctcagtgttgaagaagttcaacccaag
atagatgagcttttgaatgagcttttttccaaaataccctccggggtgggtagcagcggt
aatataaagctaagcggaacagatatagataatgtaatgacccgtggcgggagctgggct
ttggaaaagggtatgggcgaagccgaagacattaaactgactgaagaatccggcagttta
tctggtgctaatcccgacaaggtttccaataaggccaagaccagaggtgcatcccaactg
ggtacactgggttcaggcaaccattttttggaagtacaggttgtagatgaaatatttgat
cctgaagtagcggcggtgttcggagttcaggcgctgggtcaggtactttttcttatccat
accggttcacggggtttggggcatcaagtatgtactgactatgtgcaactgttaaatgaa
gcagtcaaaaaatatggcataaatttgcctgaccgccagctggcttgtgccccgctaaaa
tcagacgatgggcagaactatctagccgctatggcctgtgccgccaattatgcttgggct
aaccgccagtgcatcacccactgggcacgtgatgccttcatgaaggtatttgaaaaaggc
cggcttgatttaggtatggaccagatatacgatgtagcccataatattgccaagatagaa
gagcatatggtagacggcaaagtgcagaatgtatgtgtccaccgtaaaggtgccacccgt
tctttccctgccggccgccctgagataccggctgtttaccgaaaagtcggacagcctgtt
ataatacccggagacatgggcagatactcgtatgtagctgtaggtaccgagactgccatg
cgtgaaactttcggttctacctgccatggcgcaggccggatactcagccgcggtgcggct
aagaaaactacttccggtacacaactgctggatactctcaggtctcagggtataagtata
agggtgggtgacataggcagtctggcagaagaagcctcagaagcctacaaagatgtggct
gatgtagtggaagtaacccacaaagcaggtattgcccggaatatatttaaaaccagacca
ttaggagtaatcaaaggttag

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