KEGG   Dehalococcoides mccartyi GT: DehalGT_0808
Entry
DehalGT_0808      CDS       T01182                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
deg  Dehalococcoides mccartyi GT
Pathway
deg03410  Base excision repair
deg03430  Mismatch repair
deg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:deg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DehalGT_0808
   03430 Mismatch repair
    DehalGT_0808
   03440 Homologous recombination
    DehalGT_0808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:deg03400]
    DehalGT_0808
DNA repair and recombination proteins [BR:deg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DehalGT_0808
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DehalGT_0808
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DehalGT_0808
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: ADC74174
Position
771844..773544
AA seq 566 aa
MKILANCLWKLKPALPEETGQNFPYPPLISRLLYNRGITTIEAADLFLSPDKRLNHDPFL
FPDMEMAVSRIYKALLAGEKIVVYGDFDADGLTATAVLTTGIARLGGNVTPYIPHRITEG
YGLKISALEKHRAEGVSLVISTDCGITAIPEIKRANKIGLDVIVTDHHTPLDELPPAYAI
INPKMPCSTYPFKELAGVGVAYKLIQALYRNLGREDEAKDLLDLVAIGTVADIVPILDEN
RYLVKEGVKLLNAEPRPGLIEMAQLSRLHLGEIEPESISWIMAPRLNAAGRLEHAMAGYK
LLTATTISDSQELALWLENKNTERQQLTVRFVEKARAMLDTQFPPALLIFSDAECPQGIS
GLVAGRLSDEYYRPSIVIKTNADSATGSCRSIPDFNIIQALNHFAHLFSHFGGHAQAAGF
TLPIENLDAFVQGISAYAEEILSGMELKPFIDIDIDTDLSLLCPATLRELERLAPFGEAN
PKPVFLSRGLNITDYRSMGSNNEHLKLRIKHKGRFWDGVAFRQAKELSSFLQSPVDIVYN
LELDKWCGTDTLRLKIIDMAPSGTKI
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgaaaatattggctaattgcctctggaagctaaaaccggctcttccggaggaaactggc
cagaactttccttatccgcccctgattagccgtttgctttataaccggggcattacaacc
attgaagcggctgacctgtttctttcgccagacaagcgtttaaatcatgacccgttttta
tttcctgatatggaaatggctgtcagccgcatttacaaagccttgctggcaggcgaaaag
atagtagtctatggggattttgatgctgacgggctgacggctacggcagttttaactacc
ggcattgcccgtttgggcggaaatgtaacaccatatataccccaccgcattaccgagggt
tacggcttaaaaatatccgcccttgagaaacaccgtgcagaaggtgtttctcttgttatc
agcactgactgcggcattaccgccatacctgaaatcaaacgagcaaacaaaatagggctg
gacgtgatagtcacagaccaccacaccccgctggacgaactgccgcctgcatatgccatt
ataaaccccaaaatgccctgctccacctacccctttaaagagcttgccggagttggggtg
gcttataaacttatacaggctttgtaccgcaacctagggcgggaggatgaagccaaagat
ttactggatttggtagccataggcacggttgcggatattgtacccattctggatgaaaac
cgttatctggtaaaggagggggtaaaacttctgaatgcagaaccccgccccggcctaata
gaaatggcccagcttagccgcttgcatctgggggaaatagagccggaaagcatttcatgg
ataatggcaccccgcctgaatgcggccggacggctggaacacgctatggccggatacaaa
ctgcttaccgccactactataagtgattctcaggaactggcactctggctggaaaacaaa
aataccgaacgccagcaactaaccgttcgttttgtagaaaaagccagagctatgcttgat
acccagttcccgcctgctctgctcatattcagtgatgccgaatgccctcaaggtatcagc
ggactggtggcaggcaggctttcagatgaatactaccgcccgtctattgtcatcaagacc
aatgctgattctgctaccggcagttgccgcagcataccggatttcaatattattcaggcg
ctcaaccactttgcccacctgttcagccattttggcggacatgcccaagcggcaggtttc
acattgcccatagaaaatctggatgcgtttgtacaaggcatttccgcttacgccgaagaa
atccttagcggtatggaattaaagccgtttatagatattgatattgacacagacttaagc
ctgctctgcccggccactttgcgcgaacttgagcgtctggctccattcggagaggcaaac
ccgaagcctgttttcctcagccgcgggctgaatattactgattaccggtcaatgggcagt
aataacgaacacctaaaactacgtataaaacacaaaggccgtttctgggacggggtggca
ttccgccaagccaaagaactaagcagttttctccaatccccggtggatatagtgtataat
cttgaactggataaatggtgcggaacagacaccctccgcctgaagataattgacatggca
ccctcaggtaccaagatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system