KEGG   Dehalococcoides mccartyi GT: DehalGT_1108
Entry
DehalGT_1108      CDS       T01182                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
deg  Dehalococcoides mccartyi GT
Pathway
deg03030  DNA replication
deg03410  Base excision repair
deg03420  Nucleotide excision repair
deg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:deg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DehalGT_1108
   03410 Base excision repair
    DehalGT_1108
   03420 Nucleotide excision repair
    DehalGT_1108
   03440 Homologous recombination
    DehalGT_1108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:deg03032]
    DehalGT_1108
   03400 DNA repair and recombination proteins [BR:deg03400]
    DehalGT_1108
Enzymes [BR:deg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DehalGT_1108
DNA replication proteins [BR:deg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DehalGT_1108
DNA repair and recombination proteins [BR:deg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DehalGT_1108
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DehalGT_1108
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH RecR_HhH DNA_pol_lambd_f IMS_HHH
Other DBs
NCBI-ProteinID: ADC74468
Position
complement(1045043..1047754)
AA seq 903 aa
MSKSVIVLFDGTNLVHRAYHVLPPLTVRKTGEVVGAAFGFASILIKVLTDLKPDCYAISF
DKKGPTFRHEMFKDYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLA
TRAAAEGMEVIIASGDADSMQLVSPDIRILYPGPAGSFSNTSLYDEAAVRAKYGLGPEHV
ADYKALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKISPPGLQKKLADNAEV
ARQSKILTTIVCDLPLDFSIQECRSEHYNRQKVVDLFRELEFFRLIHRLPGGENPGGGMT
DMFNTPQKVETRYIIANGQNLDSIVKRLTETKELALAVSGTSEEAIDARLTALAISPAEG
EAYFISAEFIGSASGGQMFVSEGHPGLIALLTNKNITKTAHNAKYLMNLLASAGQEIQGL
DFDTMLSAHLLGEKNLGIKDLVFEHFGVEIADVENILTQNGKKKSFSASELSEAAQLVAD
YTFRLKGLFAAQLAEINLIDLFVNVEMPLVPILLGMERSGIMLDTDLLKGMAEKVGGQIF
KLEEAIYAQAGHSFNIGSPQQLGRILFDELKLPVIKKTKTGYSTGAEVLDELKGEHRIVD
LILEYRMLVKLKSTYLDTLPRMVNPHTRRLHTSFNQTRTATGRLSSSEPNLQNIPVRGEM
GREIRRAFIAPKGTVMLAGDYSQIDLRVLAHLSGDPALIEAFLKDQDIHTATAARLLNIL
PSEVTKEQRRLAKTVNFGVIYGMSSYGLEQATELSLAEADKFIKAYFEKYPRVAIYFAEI
KHQARTNGYVETLLGRRRYIPEINSPNRILRESAERMAINMPVQGTSADIIKLAMVRLDE
KLKEEKLKSRLLLQVHDELIFEVPDAEFKRMSALLMETMSGAVTFEIPLKVELKSGANWG
DME
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgagtaaatctgtaattgtcctttttgacggcacaaatctggttcatcgggcatatcat
gtactgccacctcttacagtccgcaaaacaggtgaagtggtgggggcggcctttggtttt
gcctctatacttataaaagtcttaaccgacctgaaaccggattgttacgctatatccttt
gataaaaaaggccctaccttcaggcatgagatgttcaaggactacaaagcccaacgtccg
cccatgcctgacgagcttgtcagccagctgggacgggtacgccagattgtggatgctttc
aatatgcctgtatacgaacagagcggttttgaggcagatgatgtgctgggcacactggct
accagagccgccgccgaaggcatggaggttataatagcctccggagacgcagactccatg
cagttggtcagtccggatattcgtattctgtatcccggcccggccggttctttttccaat
accagtctgtatgacgaggcggcagtaagggcaaagtacggtttagggccggagcatgtc
gcagattacaaagcccttatgggtgatccgtctgacaacatacccggagtacccggcata
ggcccgaaaactgcccagaaacttatagaagaatacggcggcatagaagatatatataaa
aatctggataaaataagcccgcccggtctccaaaagaaactggcagacaacgccgaagta
gcccgccagagtaaaatattaactacgattgtgtgtgatctgccgctggatttcagtatt
caggaatgtagatcggaacactataaccgccaaaaggtggtagacctttttcgtgaactg
gagtttttcaggctgattcaccgcctgccaggcggtgaaaatcctggcggcggtatgaca
gatatgtttaacaccccccaaaaggttgaaacccgctatattatagccaacgggcagaat
ctagacagcatcgtgaagcggctcacggaaaccaaagagctggcactggcagtttcgggc
acttccgaagaagctatagatgcccgcctgactgcgctggcaatttcaccggcagagggc
gaagcctattttatttctgcagaatttatcggtagtgcttcgggtgggcagatgtttgtt
tccgaaggtcacccgggtttgattgccctgcttacgaataaaaatataaccaagaccgct
cataatgccaagtacctcatgaatctgctggcttcagccgggcaggaaatacagggactg
gactttgataccatgctttctgcccacctgctgggtgaaaaaaatctgggtataaaagac
ttggtatttgaacacttcggggtggaaattgctgatgttgaaaacatacttactcagaac
ggcaagaaaaagagcttcagtgcatcagagctttcagaagccgcccagttggtggctgat
tacaccttccgcctcaagggtctgtttgccgcccagcttgccgaaatcaatctgatagat
ttgtttgtcaacgttgaaatgcctttggtacctatattactgggtatggagcgtagcggt
attatgctggataccgatttgctcaaaggtatggccgaaaaggtgggcgggcagatattt
aaactggaagaagccatatatgcccaagcgggacacagcttcaacataggttctccccag
cagctggggcggatactttttgacgaactgaaactgccggttatcaaaaaaaccaagacc
ggttattccaccggggcagaggtactggatgaactgaagggtgaacaccggattgtagat
ctgatacttgaatatcgtatgctggtcaaactgaaatctacctatctggatactctgccg
cgcatggtgaatccgcatacccgtcgcctgcataccagtttcaaccagactagaacggct
accggcagattgtcttccagtgaaccgaatctgcaaaatatacccgtcaggggtgaaatg
ggcagggaaatacggcgggcatttattgccccgaagggtaccgtaatgctggctggagat
tactcccagatagacctgcgggtgctggcccatctttccggagaccctgccctgatagag
gctttccttaaggaccaggatatccacactgctaccgctgccagattgctgaatatactc
ccgtctgaagtgacaaaggaacaacgccgtctggctaaaacggtgaatttcggagtgata
tatggcatgagcagctacgggttggaacaggctaccgagctttcgctggcagaagccgac
aaatttatcaaggcatattttgaaaaatacccgcgggtagctatttactttgcggagatt
aagcatcaggctcggactaacgggtacgttgagaccctgctgggaagacgccggtatata
cctgaaatcaattcgcccaaccgtattttgcgtgaatcagccgaacgtatggccataaat
atgcctgttcagggtacgtctgcggatattatcaagctggctatggtcaggctggatgaa
aaactgaaagaagaaaagctgaaaagccgcctgctacttcaggtgcatgacgagcttata
tttgaagtgcctgacgcagagtttaagcgtatgagtgctttgctgatggaaaccatgtca
ggtgcagttacctttgaaataccgcttaaggttgagcttaagtccggagcaaactgggga
gatatggagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system