KEGG   Deinococcus sp. AJ005: DAAJ005_04275
Entry
DAAJ005_04275     CDS       T06226                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
dein  Deinococcus sp. AJ005
Brite
KEGG Orthology (KO) [BR:dein00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dein03032]
    DAAJ005_04275
   03400 DNA repair and recombination proteins [BR:dein03400]
    DAAJ005_04275
Enzymes [BR:dein01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     DAAJ005_04275
DNA replication proteins [BR:dein03032]
 Prokaryotic type
  DNA Topoisomerases
   DAAJ005_04275
DNA repair and recombination proteins [BR:dein03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DAAJ005_04275
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: QFP75759
UniProt: A0A5J6YSI2
Position
461354..462391
AA seq 345 aa
MPGRTEILQEEYLRREGNDPKKFKYFWPDGTSYKDEDGISRIASLAVPPAYTDVFVSPDA
DAELQAFGRDAAGRLQYRYHPDFVQAGALKKWQRLTRFATALPTLREVTTSDLRLQGLPP
RKVMALMTRLLHVAHFRVGSDAYAKLHKTYGLSTLRQRHVTLEGNLITFNFRGKHGITQN
KATRNPTLAGNIGKLLELPGPWLFQTVGDDGRRRVHAPELNHYLKEVIGPFTAKDFRTWG
GTLLAAEYLAEAGVAGTERETRKVLVDCVKHVAEDLGNTPAVTRGSYICPVIFDRYLEGK
VLDDYEPRAGRLPAELEGLSRSEAALKRLLESEKVLKVGRGKRAA
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgccgggccgcaccgaaatcttgcaggaggaatacctgcgccgcgagggcaacgatccg
aagaaattcaaatacttctggccggacggcacgagttacaaggacgaagacggcatctcc
cgtatcgccagtctggccgtgccacccgcgtacactgacgtctttgtctcgcccgatgcg
gatgccgagttacaggcatttggccgcgacgccgccggacgtctccagtaccgctatcac
cctgatttcgtgcaggccggggcactgaagaaatggcagcggctgacgcgctttgccact
gctttaccgacactgcgcgaggtcaccacctccgatctgcgtcttcagggactgccgccg
cgcaaggtgatggccctgatgacccggctgctgcacgtcgcgcatttccgggtgggcagt
gacgcctacgccaagctgcacaaaacgtatggcctcagcacgctgcgccagcggcatgtc
acgctggagggcaacctgatcaccttcaacttccggggcaagcacggcatcacgcagaac
aaggccacgcgcaaccccacgctggcgggcaacatcggcaagctgctggaactgcccggc
ccgtggctgtttcagacggtgggtgatgatggccgccgccgcgttcacgccccggaactg
aaccattatctgaaggaggtgatcggcccctttaccgccaaggatttccgcacctggggc
ggcacgctgctggccgccgaatatctggccgaggccggggtggcgggaaccgagcgcgag
acccgtaaggtgctggtggactgtgtcaagcatgtggccgaggacctgggcaacacgccc
gccgtgacgcgtggcagttatatctgccctgtcatttttgaccgctatctggagggcaag
gtgctggacgactacgaacctcgcgccggacgcctgcccgccgaactggagggcttgagc
cgcagcgaggcggccttaaagcggctgctggagagtgagaaggtgttgaaggtggggcgg
gggaaaagagcggcttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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