KEGG   Deinococcus sp. AJ005: DAAJ005_16365
Entry
DAAJ005_16365     CDS       T06226                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dein  Deinococcus sp. AJ005
Pathway
dein03410  Base excision repair
dein03430  Mismatch repair
dein03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dein00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DAAJ005_16365
   03430 Mismatch repair
    DAAJ005_16365
   03440 Homologous recombination
    DAAJ005_16365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dein03400]
    DAAJ005_16365
DNA repair and recombination proteins [BR:dein03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DAAJ005_16365
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DAAJ005_16365
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DAAJ005_16365
SSDB
Motif
Pfam: RecJ_C DHH DHHA1 RecJ_OB His_biosynth
Other DBs
NCBI-ProteinID: QFP77848
UniProt: A0A5J6Z273
Position
complement(2989267..2991432)
AA seq 721 aa
MKAVSPTAVPAARWLLAPPASREELLSTMRQWRVSPPLAQVLHGRGLTPALLDPPLVLTP
NPALREAARRIVGAVRGKKRIRIHGDYDADGVSATAVLVLGLRALGANVHGFIPHRLNEG
YGVHPDKVTEHAESCDLLVTVDCGVSNVDEVAALLKLGTEVIVTDHHTPGDNFPAALVVH
PSLTGGYDPALHNLTGAGVAYHLLWAIHAELGLAEPRALSALATLGTVADVAPLIGENRA
LVRAGLEALRETELPGLRALLDSGRVQRPTARDVAFVLAPRINAAGRLGEADVALDLLTT
PSRHEATRLAEYLEIRNVERRKLQDEMFAQALQIADPSDPALVVTHPEWHAGVMGIVASK
LVETYHKPVFIVAQGKGSVRSTPGISAVNGLTYSRDLLKRYGGHTGAAGFSLDEAQFGAF
RERIHAYVQQFPSPVPRVRLDAALPTLGATLELVDGASTFEPFGEGHLPPLWHVRDELTE
TRLVGKRGDSLQFRVGALRGIKYGEHDATPGERDLATGLVVSEWRGQTRLEYHAQALRPP
AQVSLDLFVPDGLDLPRLNPKAAMQRLTAGASAYATPAVADYLRDNVPGVRLVEAGDLWS
GDELILYALPTEDDLRRWLTSGGAVPPGKVAFALGPKTLSELEGALTRHHLSAPPANPLA
DATADEAHMARAADAYRHWQWAHHYRTLDNGGWTASVHAMLGLDLPLEGPNVQTAELALG
D
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgaaggccgtttccccgactgctgtgcctgcggcccgctggctgctggccccccctgcc
agccgcgaggaactgctctcgaccatgcggcaatggcgtgtctcgccgccgctggcgcag
gtgctgcacggacgcggcctgaccccggcgctgctggatccgccgctggttctgaccccc
aatccggcgctgcgtgaggcggcccggcgcatcgtgggcgcggtacgtggcaagaaacgc
atccgcatccacggcgattacgacgcagacggtgtgagtgccaccgccgtgctggtgctg
ggcctgcgggcgctgggcgcgaatgtccacggcttcatcccccaccgtctgaacgagggt
tacggcgtccatcccgacaaggttactgaacacgcagagagctgcgatctgctggtcacg
gtggactgcggcgtcagcaacgtggacgaggtggccgccctgctcaagctgggaaccgag
gtgattgtcaccgatcatcacacgccgggcgacaatttcccggcggcgctggtggttcac
cccagcctcacgggcggctatgacccggccctgcacaacctgaccggcgcgggggtggcc
taccatctgctgtgggccatccatgctgagctgggcttggccgagccgagagcgctgtcc
gccctagcgacgctgggcaccgtggccgacgtggccccgctgatcggcgagaaccgcgct
ctggtgcgcgctggtctggaggcgttgcgggagaccgaactgcccggtctgcgcgccctg
ctggattccgggcgggtgcagcggcccacggcgcgggatgtggcctttgtcctcgccccc
agaatcaacgctgccgggcggctgggcgaggcggatgtcgcgctggacctgctgaccacg
cccagccgccacgaggccacgcgactggccgagtatctggaaattcgcaacgtagaacgg
cgcaagttgcaggacgagatgttcgcgcaggcgttgcagatcgccgatcccagtgacccg
gccctggtggtcacgcacccggagtggcacgcgggcgtgatgggcatcgtggccagcaag
ctggtggagacctaccacaagcccgtgtttatcgtggcgcagggcaagggttcggttcgc
agcacccccggcatcagcgccgtgaatgggctgacgtacagcagggatctgctcaagcgc
tacggcggccataccggagcagcgggtttctcgctggacgaggcgcagttcggggctttc
cgcgagcgcatccacgcctacgtgcagcagtttccgtcgcccgtgccgcgtgtgcggctg
gacgcggcgctgcccacgctgggcgccacgcttgagctggtggacggggccagcaccttc
gagccgttcggcgagggccatctgcccccgctgtggcacgtgcgggacgaattgaccgag
acgcggctggtgggcaaacgcggagacagcctgcaatttcgcgtcggggcactgcgcggc
attaaatacggcgaacacgacgccacgccaggagaacgtgatctggcaaccggtctggtg
gtcagcgagtggcgcggtcagacccggctggaataccatgcgcaggcgctgcgtccaccc
gctcaggtgtctctggacctcttcgttcctgatggtctggacctgccccgcctgaatccc
aaggccgccatgcagcgcctgactgccggggccagcgcctacgccacgccagccgtggcc
gattacctgcgcgacaatgtgccgggcgtgcggctggtagaggcgggggacctctggtct
ggggacgaactgatcctgtacgccctgcccaccgaggacgatctgcggcgttggttgacc
tcgggcggcgcagtgcctccagggaaggtggccttcgcgctggggccgaagaccctatcg
gaactggaaggcgcgttgacccgccaccacctgagcgccccccccgccaacccgctggcc
gacgccaccgcagacgaggcccacatggcccgtgccgccgatgcctaccgtcactggcag
tgggcacaccattaccgcacgctggacaatgggggttggacggcctcggtccacgccatg
ctggggctggacctgccgcttgaagggccgaatgtgcagacggcagagctagcgctggga
gactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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