KEGG   Pseudodesulfovibrio indicus: AWY79_05945
Entry
AWY79_05945       CDS       T04404                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
dej  Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:dej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dej03009]
    AWY79_05945
Enzymes [BR:dej01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     AWY79_05945
Ribosome biogenesis [BR:dej03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AWY79_05945
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 MTS Methyltransf_25 Methyltransf_15 TPMT Methyltransf_12 Cons_hypoth95 Methyltransf_11 N6_N4_Mtase PrmA
Other DBs
NCBI-ProteinID: AMK10683
UniProt: A0A126QKW0
Position
1275455..1276837
AA seq 460 aa
MPLHKDEIIECSIESLAFGGRGVARVDGMAVFVAGGLPGDVVTARVVKAKKRFAEAEAVS
VVAPSPHRVKPRCPHFGECGGCAVQDLDYAEQVAQKAAQVENALRRIGGVESLSMDPALP
SPAVWNYRNKMEFVFEQRDNKLHLGLRAAQAAGDKGLPPVVDIEECHLCAERDVEILRLA
REFAQGSGLPAFDPSANEGFWRHLVVRHTALGEVMVHLITSDDEKLYGRAEGLGETLVDR
FPELTSFIHSSRAKRSLAATGEKIEFRLGSRTVEEMVEHDGRQARYHIAPNAFFQTNTAG
AGALFGAVREYGAFDGSETLLDLYCGCGAIGIFLADTVRKVVGYEISEEAVAKAWSSAKL
NGLTNCEFTAGTLDGGDVLKGLPKADVLVIDPPRAGIHENTAQAILKLAPARILAVSCDP
ATLARDVKRLSEAYELKRARAVDLFPHTHHIETVALLERR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgcccttgcacaaagacgaaatcatagaatgttccatcgaatccctggccttcggcggc
cggggcgtggcccgcgtggacggcatggccgtgttcgtggccggcgggttgcccggcgat
gtcgtgaccgcccgcgtggtcaaggccaagaaacggttcgccgaggccgaggccgtgtcc
gtggtcgcgccgtcaccgcaccgggtgaagccgcgctgtccccacttcggggagtgcggc
gggtgcgcggtccaggacctggactacgccgagcaggtggcccagaaggcggcccaggtg
gagaacgcgctccggcgtatcggcggcgtggagtccctgtccatggacccggccctgccg
tcgcccgccgtgtggaactaccgcaacaagatggagttcgtcttcgagcagcgggacaac
aagctgcacctcggcctgcgcgcggcccaggccgccggcgacaaggggctgcccccggtg
gtggacatcgaggagtgccacctctgcgccgagcgggacgtggagattttgcgcctggcc
cgggagttcgcacaggggtccggcctgcccgccttcgacccctcggccaacgaggggttc
tggcgtcacctggtggtgcgccataccgcgctgggcgaggtcatggtccatttgatcact
tcggacgacgagaagctctacggccgggccgagggactgggcgagaccctggtggaccgc
tttccggagctgacctccttcatccactcctcccgcgccaagcggtccctggccgccacg
ggcgagaagatcgagttccggctgggatcgcgcaccgtggaggagatggtcgaacacgac
ggccgccaggcgcgctaccacatcgcgcccaacgcctttttccagaccaacaccgccggt
gcgggcgcgctcttcggcgcggtccgcgagtacggcgcgttcgacggcagcgagacgctg
cttgacctctactgcggttgcggggccatcggcatcttcctggccgacacggtccgcaag
gtggtcgggtacgagatcagcgaggaggccgtggccaaggcgtggtccagcgccaagctc
aacgggctgaccaactgcgagttcacggccgggaccctggacggcggggacgtgctcaag
gggctgcccaaggcggacgtgctggtcatcgacccgccccgcgctggcatccacgaaaac
acggcccaggcgatcctcaagctggccccggccaggattctcgccgtgtcctgcgatccg
gccaccctggcccgcgacgtgaagcgcctttccgaggcctacgaactcaagcgcgcccgg
gccgttgacctgttcccgcacacccaccacatcgagaccgtggctctgctggaacgccga
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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