KEGG   Delftia sp. Cs1-4: DelCs14_5290
Entry
DelCs14_5290      CDS       T01497                                 
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
del  Delftia sp. Cs1-4
Pathway
del03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:del00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DelCs14_5290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:del03400]
    DelCs14_5290
Enzymes [BR:del01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DelCs14_5290
DNA repair and recombination proteins [BR:del03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DelCs14_5290
    RecFOR pathway proteins
     DelCs14_5290
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 nSTAND3 AAA_14 AAA_22 AAA_16 AAA_3 Rad17 AAA_18 NTPase_1 TsaE RNA_helicase DUF815 GGDEF_2 AAA_33 AAA_17 AAA_28 AAA_19 Sigma54_activ_2 ABC_tran NB-ARC AAA_24
Other DBs
NCBI-ProteinID: AEF92260
Position
complement(5953726..5954811)
AA seq 361 aa
MSIHTDDFGQGGFAQGGFPPDKAPDKPRMISAAPVSRGEEAMERALRPKLLQEYVGQAKA
REQLEIFIGAARKRNEALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDL
AALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTL
VGATTRAGMLTNPLRDRFGIVARLEFYTAEELARIVRRSAGLLNAPIDDEGAFEIARRSR
GTPRIANRLLRRVRDYADVRGDGSITRELADRALAMLDVDPQGFDIMDRKLLEAVVHRFD
GGPVGLDNIAASIGEEAGTIEDVIEPYLIQQGFLQRTPRGRMATQAAYRHLGLPVPEKDT
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagcatccataccgacgatttcgggcagggcggctttgcgcagggcggcttcccgcca
gacaaggcaccggacaagccgcgcatgatttcggcagcgccggtctcgcgcggggaagag
gccatggagcgcgcgctgcgccccaagctgctgcaggagtacgtgggccaggccaaggcg
cgcgagcaactggagatcttcatcggcgcggcccgaaagcgcaatgaggcgctggaccat
gtgctgctgttcggcccgccgggcctgggcaagaccacgctgtcgcacatcatcgcggcc
gagctgggcgtgaatctgcgccagaccagcggccccgtgctggaaaagcccaaggacctg
gcggcgctgctgaccaacctcgaagccaacgatgtgctgttcatcgacgagatccaccgc
ctgtcgcccgtggtcgaggaaatcctctacccggcgctggaggactaccagatcgacatc
atgatcggcgaggggccggcggcgcgctccatcaagctggacctgcagccgttcacgctg
gtgggcgcgaccacgcgcgcgggcatgctgaccaacccgctgcgcgaccgcttcggcatc
gtggcgcggctggagttctatacggccgaggagctggcgcgcatcgtgcggcgcagtgca
ggcctgttgaacgcgcccatcgatgacgagggcgccttcgagatcgcgcgccgctcgcgc
ggcacgccacgcattgccaaccgcctgctgcgccgcgtgcgcgactatgccgatgtgcgc
ggcgacggcagcatcacgcgcgagctggccgaccgcgcgctggccatgctcgatgtcgat
ccccagggcttcgacatcatggaccgcaagctgctggaggccgtggtgcaccgcttcgac
ggcggccccgtgggcctggacaacatcgcggccagcatcggcgaggaggcgggcaccatc
gaggatgtcatcgagccctacctgatccagcagggctttttgcagcgcacgccgcgcggg
cgcatggcgacccaggcggcgtaccgccatctcgggttgccggtgccagaaaaagacacc
ccctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (27)   
   Pfam (27)   
All databases (36)   

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