KEGG T04003: XM25

Devosia sp. H5989: XM25_07595

Entry

XM25_07595        CDS       T04003

Name

(GenBank) Deoxyribodipyrimidine photolyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

deq Devosia sp. H5989

Brite

KEGG Orthology (KO) [BR:deq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:deq03400]
    XM25_07595
Enzymes [BR:deq01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     XM25_07595
DNA repair and recombination proteins [BR:deq03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    XM25_07595
Prokaryotic type
    XM25_07595

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase

Other DBs

NCBI-ProteinID:

AKR55665

Position

1602577..1603989

AA seq 470 aa
MADTAIVWFRNDLRVRDNPALTAAIAESANVVALFVHETDKALRPIGSAARWWLHHSLRA
LAQDLASLGIPLLEAHGEAKASVLRVLREHDARALFWNRRYGPAARQIDSDIKAEASKHA
EKVQSFSATLLTEPWELTTGQGKPYSVFTPFWKSLQQQHIATPLPMPRGRKGPLGRAAPV
DADYREPTWASKFARFWDVGEDAARERLSDFLEDELPNYSEGRDIPARPLTSRLSPHLRF
GEISPRQIWHSAAALAQKEHRLAAQVDKFLSELAWRDFSYSLLYHREDIANVPMQEKYAG
MPWRIDDSQFEAWKHGRTGIPIIDAGMRQLWASGWMHNRVRMLVASFLAKNLLIDWRVGE
QWFWDCLVDADDANNPASWQWVAGSGADAAPYFRIFNPVTQAERFDAAGQYVREWMPELA
QLPDKWIHNPAAAPGDVLRAAKVELGVVYPRPIVDLGLSRQRALDALKQL

NT seq 1413 nt +upstreamnt +downstreamnt
atggccgataccgccatcgtctggttccgcaacgatctgcgcgtgcgcgacaacccggcc
ctgactgccgccatcgccgaatccgctaacgtggtggccctcttcgtgcacgagaccgac
aaggctctccgcccgatcggctccgccgccagatggtggctccaccacagcctgcgcgct
ctcgctcaggacctggcctctctcggcatccccttgcttgaggcgcacggcgaagccaag
gcgtccgtcttgcgtgtcctgcgggaacacgacgctcgggcgctcttctggaatcgccgt
tatggaccggcggcccggcaaatcgattccgacatcaaggccgaggcgagcaagcacgcc
gaaaaggtgcaatccttctccgcaacgctgctgaccgaaccctgggagcttaccaccggc
cagggcaagccttattcggtcttcaccccattctggaagtcgctgcaacagcagcacatc
gcgacgcctctacccatgccccgcggccgcaagggcccgctcggacgcgcagccccggtt
gacgctgactatcgagagcccacctgggccagcaaattcgctcgcttctgggatgtcggc
gaagacgcggcacgggagcgtctgtcggacttcctcgaagacgaactgcctaactacagc
gagggacgcgacatacctgcaaggcccctcacctcgcgcctctcgccccacctgcggttc
ggcgaaatctcgcctcgccagatatggcattcggctgcagccctggcacaaaaggaacac
cggctggccgcccaggtcgacaagttcctctccgagctcgcctggagggacttttcatat
tcccttctctaccaccgggaggacatcgccaacgtccccatgcaggaaaagtacgcgggc
atgccctggcggatcgacgatagccagttcgaggcgtggaaacacggccgcaccggcatc
ccgatcatcgatgcgggcatgcgccagctctgggcttcgggctggatgcacaatcgggtc
cgcatgctcgtcgcctcgttcctcgccaagaacctcctcatcgattggcgggtcggcgag
caatggttctgggactgcttggtagatgccgacgacgccaacaatccggcgagctggcag
tgggtggcaggttcaggcgcggacgccgcgccctacttccggatcttcaacccggttacg
caagccgaacgctttgacgccgccggccaatacgtccgtgaatggatgccggagctggcg
caattgcccgacaaatggatacacaatcccgccgccgctcccggcgacgtcctgcgcgca
gccaaggttgaactaggcgtcgtctatccgcggccgatcgtggacctcggcctgtcgcgg
caacgcgccctggatgccctgaagcagctttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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