KEGG   Devosia sp. H5989: XM25_12200
Entry
XM25_12200        CDS       T04003                                 
Name
(GenBank) Excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
deq  Devosia sp. H5989
Pathway
deq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:deq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    XM25_12200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:deq03400]
    XM25_12200
DNA repair and recombination proteins [BR:deq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XM25_12200
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 UVR GIY-YIG HHH_2 HHH DprA_N
Other DBs
NCBI-ProteinID: AKR56542
Position
2498282..2500165
AA seq 627 aa
MNDEQPKQTGPEVIKAFVKTLPSAPGVYRMLDTEGEVIYVGKARSLKSRVTNYTRPEGLP
VRTQRMIAATHTMEFVRTETEAEALLLEANLIKRLRPRFNVALRDDKSFPYILIATDHEA
PEVLLHRGTRRRPGHYFGPFASAGAVRRTITSLQKAFLLRNCSASFYAARTRPCLQFQIK
RCSAPCTREISLADYGVLVEEAKDFLEGKSKAVQSRLSNEMNAAAEALDFERAALLRDRL
SALALIQSQGDITSNSVEEADIFAVAQEAGQFCVQVFFFRSYQNWGNHAFRPRADASLSE
SEVLEAFITQFYDTRTPPRLVLTSHEPAERELIEEALSTRAGSRVYIQTPQRGEKRDLVN
YALNNAREALSRQLAEGATQRTLLEGVAELFGLDEAPRRIEVYDNSHISGTNAVGGMIVA
GEEGFSKKHYRTFNIKSKDIAPGDDFGMMREVLTRRFSRLAAESEEDAEDEATGMPDWPD
VVFIDGGAGQLNAVREVIAGLNLPKEVTFIGIAKGEERDAGREKFHMEGREPFMLPHRDP
VLYYVQRLRDEAHRFAIGTHRARRKKDVVKNPLDEIEGIGPTRKRALLNHFGSAKAVSRA
ALADLEAIPGISTQMAQTIYDHFNRTE
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgaacgacgaacaacccaagcaaaccggtcccgaggtcatcaaggccttcgtcaagacc
ctgccttccgcgccgggcgtctaccgcatgctcgatacggaaggcgaagtcatctatgtg
ggcaaggcgcgcagcctcaagtcgcgcgtcaccaactacacgcgccccgaaggcctgccc
gtccggacccagcggatgatcgccgccacccacaccatggagttcgtgcgcaccgagacg
gaggccgaggcgcttctcctcgaagccaacctcatcaagcgcctgcgcccccgcttcaac
gtggcgctgcgtgacgacaagagttttccgtacattctgatcgccaccgatcacgaggcg
cccgaggtcttgcttcatcgtggcacgcgtcggcgtccggggcattatttcggccccttt
gcctcggccggcgccgtgcggcgcaccatcacgtcgctgcaaaaggcgttcctgctgcgc
aattgctcggccagcttctatgcggcccgcacccggccctgcctgcaattccagatcaag
cgctgctcggccccctgcacgcgcgaaatctcgctggccgactacggggttctcgtcgaa
gaggccaaggacttcctcgagggcaagtccaaggccgtgcagtctcgcctgtcgaacgag
atgaacgccgccgccgaggcgctcgatttcgagcgcgccgccttgctgcgcgatcgcctg
agcgccctcgccctcatccagagccagggcgacatcacctccaacagcgtcgaggaagcc
gacatcttcgccgtcgcccaggaggcggggcagttctgcgtccaggtcttctttttccgt
tcctaccagaactggggcaatcacgccttccgaccgcgcgccgacgccagcctgagcgaa
agcgaagtactcgaggccttcatcacccagttctacgatacccgcacgccgccgcgcctg
gtgctgaccagccacgaaccggccgaacgcgaactgatcgaggaagccctctccacccgc
gccggttcgcgtgtctacatccagacgccccagcgcggcgagaagcgcgacctggtcaat
tacgccctcaataacgcgcgtgaggccctcagccgccagctcgccgaaggcgcgacacag
cgcacgctcctcgagggcgtggccgaactcttcgggctggacgaagccccgcgccgcatc
gaggtttacgacaactcccacatctcgggcaccaacgctgtgggcggaatgatcgtggcg
ggcgaggaaggcttctccaagaagcactaccgcacgttcaacatcaaatccaaggacatc
gctccgggcgacgacttcgggatgatgcgcgaggtcctgacgcggcgcttctcgcgcctc
gccgccgagagcgaggaagatgcagaggacgaggccaccggcatgcccgactggcccgat
gtcgtcttcatcgacggcggcgccggccagctcaatgccgtgcgtgaagtcatcgccggc
cttaatcttcccaaggaagtgaccttcatcggcatagccaagggcgaggaacgtgatgca
gggcgcgaaaaattccacatggaaggccgcgagcccttcatgctgccgcaccgcgacccc
gtcctctactacgtccagcgcctgcgcgacgaagcccaccgcttcgccatcggcacgcat
cgcgcccggcgcaagaaggacgtggtcaagaaccccctcgacgagatcgaaggcatcggc
ccgacgcgaaagcgcgccctcctcaaccacttcggctctgccaaggccgtcagccgcgcc
gccctcgccgacctcgaggcaatccccggcatttcgacccagatggctcagaccatctac
gaccacttcaaccggaccgaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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