KEGG   Cavenderia fasciculata (cellular slime mold): DFA_06280
Entry
DFA_06280         CDS       T02668                                 
Symbol
ubqB
Name
(RefSeq) ubiquitin/ribosomal protein L40 fusion protein
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03010  Ribosome
dfa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    DFA_06280 (ubqB)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    DFA_06280 (ubqB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:dfa03011]
    DFA_06280 (ubqB)
   04121 Ubiquitin system [BR:dfa04121]
    DFA_06280 (ubqB)
Ribosome [BR:dfa03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    DFA_06280 (ubqB)
  Archaea
    DFA_06280 (ubqB)
Ubiquitin system [BR:dfa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   DFA_06280 (ubqB)
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Ubiquitin_5 Rad60-SLD_2 TBK1_ULD DUF2604 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 14876571
NCBI-ProteinID: XP_004361988
UniProt: F4PKL3
Position
Unknown
AA seq 138 aa
MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIEPSLVLLARKYKCDKMICRKCYARLHPRAVNCRKKKCGHSNNL
RPKKKLLNHLTNGTKFEY
NT seq 417 nt   +upstreamnt  +downstreamnt
atgcagatcttcgttaagactttaacaggaaagaccatcactcttgaagttgaaggttca
gataccatcgaaaacgtcaaggctaagatccaagacaaggaaggtatcccacccgatcaa
caacgtcttatctttgccggtaagcaactcgaagacggtcgtaccctctcggattacaac
atccaaaaggaatctaccctccatctcgttctccgccttagaggtggtatcgagccatcc
ctcgttcttctcgcccgtaaatacaagtgcgacaagatgatttgcagaaagtgttacgcc
agactccacccacgtgctgtcaactgccgtaagaagaagtgtggtcactccaacaacctc
agaccaaagaagaagttattgaatcatcttactaatggtacaaaattcgaatattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (598)   
   KEGG ORTHOLOGY (1)   
   RefGene (594)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (617)   

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