KEGG   Deinococcus ficus: DFI_01280
Entry
DFI_01280         CDS       T05674                                 
Name
(GenBank) ribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
dfc  Deinococcus ficus
Brite
KEGG Orthology (KO) [BR:dfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dfc03016]
    DFI_01280
Enzymes [BR:dfc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     DFI_01280
Transfer RNA biogenesis [BR:dfc03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    DFI_01280
SSDB
Motif
Pfam: RNB RNase_II_C_S1 Sec66
Other DBs
NCBI-ProteinID: ASN81929
UniProt: A0A221SZ53
Position
268492..269877
AA seq 461 aa
MTVTPELTPAQRTEVELLARGKQEKSRTLRDLKLPETPEAAHALLLRLGVWTEAHTPYAD
RLQAALSPVALPVPAFPDEARLDLTHLPGFAIDDEGNRDPDDAVAVEALAGGLTRLWVHV
ADVSALVPPDSPLDQEARARGATLYLPDRTVGMLPDALVEQAGLGLHDVTPALSVSLDLD
AEGNAEAVDVQLTRVRVQRLTYSQAQAQLDAGQEPFVTLARLARASRQLRESEGALSIDL
PEVRVKADEHGASVTPLPKPEMRQVVQECMTLAGWGAAIFADDNEIPLPFATQDHPTREV
RGDTLSAQWARRKTLARTRFQPSPGPHHGMGLDLYAQVTSPMRRYLDLVVHQQLRAFLAG
GEPMPGKVMASHIAQAQLNADGTRQAERLSRRHHTLRFVAAQPDRVWDAVVVDRRGPQAT
LLIPDLAFDVPMSTPAAPGTALRVQLTDVNLPALSVRVRAV
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaccgtcacgcccgaactcacgcccgcgcagcgcaccgaggtggaactgctcgcccgc
ggcaaacaggaaaaaagccgcaccctgcgcgacctgaaactcccggaaaccccggaggcc
gcccacgccctgctgctgcgcctgggcgtctggaccgaggcgcacaccccgtacgccgac
cggctgcaggccgccctgagccccgttgccctgcccgtgcccgccttcccggacgaagcg
cgcctggacctgacgcacctgccgggcttcgccatcgacgacgagggcaaccgcgacccg
gacgacgccgtggccgtcgaggccctggcaggcggcctgaccaggctgtgggtgcacgtc
gcggacgtctcggcgctggtgccgccggacagcccgctggaccaggaggcccgcgcgcgc
ggcgccacgctgtacctcccggaccgcacggtcggcatgctcccggacgccctggtcgag
caggccggcctgggcctgcacgacgtgacgcccgccctgtcggtgtcgctggacctggac
gccgagggcaacgccgaggcggtggacgtgcagctcacccgcgtgcgcgtgcagcgcctc
acgtactcgcaggcgcaggcgcagctggacgccgggcaggagccgttcgtgaccctggcc
cgcctggcccgcgccagccggcagctgcgcgaatcggaaggtgccctgagcatcgacctg
ccggaggtgcgcgtgaaggccgacgagcacggggccagcgtgacgcccctgccgaaaccc
gagatgcggcaggtggtgcaggagtgcatgaccctggccggctggggcgcggcgatcttc
gcggatgacaacgagatccctctgccgttcgccacgcaggaccaccccacccgcgaggtc
cgtggggacaccctgagtgcgcagtgggctcggcgcaagacgctggcccgcacgcgcttc
cagccgtcgccgggcccgcaccacggcatgggcctggacctgtacgcgcaggtcaccagc
cccatgcgccgctacctggacctggtggtgcaccagcagctccgggcgttcctggccggc
ggggagccgatgccgggcaaggtgatggcctcgcatatcgcgcaggcgcagctgaacgcg
gacggcacccggcaggccgagcgcctgagccgacggcatcacacgctgcggttcgtggcc
gcgcagcctgatcgcgtgtgggacgcggtggtcgtggaccggcggggcccgcaggcgacc
ctgctgatcccggacctggccttcgacgtgccgatgagcacgcccgcggcgcccggcacg
gccctgcgtgtgcagctcacggacgtgaacctgccggcgctgagtgtccgggtccgggcg
gtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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