KEGG   Deinococcus ficus: DFI_05700
Entry
DFI_05700         CDS       T05674                                 
Name
(GenBank) chromosome segregation protein SMC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
dfc  Deinococcus ficus
Brite
KEGG Orthology (KO) [BR:dfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dfc03400]
    DFI_05700
DNA repair and recombination proteins [BR:dfc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DFI_05700
    Archaeal homologous recombinant proteins
     DFI_05700
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_29 AAA_21 AAA_15 ABC_tran Gmx_para_CXXCG MMR_HSR1
Other DBs
NCBI-ProteinID: ASN80560
UniProt: A0A221SVA5
Position
complement(1152422..1155157)
AA seq 911 aa
MRPLKLEVQGFTAFRQFTELEFGDLELFALVGPTGSGKSSLLDAMTFALYGETERLGSTK
LDALISQGERGMNVALTFEVGGVTYRAARTKGRKQAENEVRFERLDPDGRWTNLSEGGMR
GVNDRIRDVLGLDFRNFTRCVMLPQGEFSRLLHGSGKDRQALLGELTGLDRVQDMQRYAS
DRAKDLKHQSASLNTLLDGEYAGVTAQAVAALRAEREATDARAEALTDTREALQNRQQRL
RDQEKVYRAREDTALRVRTLDLRAAGVQEGADRAARARRVAGVLPLLDTAERTRIAQERE
ARERARAEAAAQQAERAAAAALDAAQAAATQEARIPDLEARAEALKEAEADAARLKRAGG
TPQTTHPSPLPWDEDAHFTAREAAQKAEKLRQERVQLETEKTALGAMQTRLKAEEDLQAR
EAADRDRVEREGKQAKTDLDAAQKDLDTARLEAGLASHRAHLHVGDDCPLCGQTVQRLPN
APVVNLGALEDRVQVLQATLDDRRTRFSTLRADLKTRAKWIEDKRVEVADWEAALKAREQ
DVRAAEALITGDPATEAQRLLAGLAARVREAGSDPAGARRQALADIQGIRRRVQEAQAAL
ARAQGDVAAAAATLKSAAAAASSRDAEAQDAQSQLQAALDALGMTAAQARGAGLDEADIV
ALEEAARTHTAQVAQLREALAELDRQLGAAPYDPAELAQVIRDLTATDAALKEVREQAGR
LAQSELDLRARLDRKGTIEAQAQAASRQLDTWQTLTNTLKANEFQQFLLAEVEAQLLTRA
GILLHDISDGRYRLALEKGDYVVQDLWNAGEVRGVKTLSGGETFLASLSLAIALSDYLAG
NKILGALFLDEGFGTLDPQALEAVAGALENLRTQGRMVGIVTHVESLSERLPSRLLVTKS
VAGSSVHRLDA
NT seq 2736 nt   +upstreamnt  +downstreamnt
gtgaggcccctgaagctggaggtgcagggcttcacggcgttccggcagttcacggaactg
gagttcggggacctggaactcttcgcgctggtcgggccgaccggcagcggcaagagcagc
ctgctggacgccatgaccttcgcgctgtacggcgagacggagcggctgggcagcacgaag
ctggacgccctgatcagccagggcgaacgcggcatgaatgtcgccctgaccttcgaggtg
ggcggcgtgacgtaccgcgcggcgcgcacgaagggccgcaagcaggcggagaacgaggtg
cggttcgagcgcctggacccggacgggcggtggacgaacctctcggaaggcgggatgcgt
ggcgtgaacgaccgcatccgggacgtgctgggcctggacttccggaacttcacgcgctgc
gtgatgctgccgcagggcgagttctcacggctgctgcacggcagcggcaaggaccggcag
gcgctgctgggcgaactgaccggcctggaccgcgtgcaggacatgcagcgctacgcctcg
gaccgcgccaaggacctcaagcaccagtcggcgtcgctgaacacgctgctggacggcgag
tacgcgggcgtgaccgcccaggccgtggccgccctgcgggccgagcgcgaggcgacggac
gcgagggccgaggcgctcaccgacacccgcgaggccctgcagaaccgccagcagcgcctg
cgggatcaggagaaggtgtaccgcgcccgcgaggacaccgccctgcgcgtcaggaccctg
gacctgcgtgccgccggcgtgcaggagggcgcggaccgggccgcccgggcccgccgggtg
gcgggcgtgctgccgctgctggacaccgccgagcgcacccgcatcgcgcaggagcgcgag
gcgcgcgaacgggcgcgggccgaggcggccgcgcagcaggcggaacgggccgcggcggcg
gcactggacgccgcgcaggcggcggccacacaggaggcccgcattccggacctcgaagcc
cgcgccgaggccctcaaggaggccgaggccgacgcggcccgcctgaaacgcgccgggggc
acgccccagaccacgcaccccagtcccctgccctgggacgaggacgcgcacttcacggcg
cgggaggcggcgcagaaggccgagaagctgcggcaggagcgcgtgcagctggaaaccgag
aagaccgccctgggcgccatgcagacccgcttgaaggccgaggaggacctgcaggcccgc
gaggccgccgaccgggaccgcgtggaacgcgagggcaagcaggcgaaaaccgacctggac
gccgcgcagaaggacctggacaccgcccgcctggaggcggggctggcgtcgcaccgcgcg
cacctgcacgtcggggacgactgccccctgtgcgggcagaccgtgcagcggcttccgaac
gcgccggtggtgaacctgggcgcgctggaggaccgcgtgcaggtgctgcaggccaccctg
gacgaccgccgcacccgcttcagcacgctgcgcgccgacctgaagacccgagcgaagtgg
atcgaggacaagcgcgtcgaggtcgccgactgggaggcggccctcaaggcccgggagcag
gacgtgcgggccgccgaggcgctgatcacgggcgacccggccaccgaggcacagcggctg
ctggccgggctggcggcccgcgtgcgtgaggcgggcagcgatccggccggcgcgcggcgg
caggccctggcggatattcagggcatccggcggcgcgtgcaggaggcgcaggcggccctg
gcccgcgcgcagggggacgtggcggcggcagcagccacgctgaagtcggcggcggcggca
gcatccagccgcgacgcggaggcgcaggacgcgcagagccagttgcaggcggcgctggac
gccctgggcatgaccgccgcgcaggcgcgcggtgcgggcctggacgaggccgacatcgtg
gcgctggaggaggcggcccgcacgcacaccgcccaggtcgcgcagctgcgcgaggcgctg
gcggaactggaccggcagctgggcgccgcaccgtacgatccggctgaactggcccaggtc
atccgcgacctgaccgccacggacgccgccctgaaggaggtccgggagcaggccgggcgc
ctcgcgcagtcggaactggacctgcgggcgcggctcgaccgcaagggcaccatcgaggcg
caggcgcaggcggcctcgcgacagctggacacctggcagaccctgacgaacaccctgaag
gccaacgagttccagcagttcctgctggcggaggtggaggcgcagctgctcacccgcgcc
ggcatcctcctgcacgacatcagtgacggccggtaccggctggcgctggaaaagggcgac
tacgtggtgcaggacctctggaacgccggggaggtccgcggcgtgaagaccctctccggc
ggggagacgttcctggcgtccctgtcgctggcgatcgcgctgagtgactacctggcgggg
aacaagattctgggcgcgctgttcctggacgagggcttcgggacgctggacccgcaggcg
ctggaggcggtggcgggcgcgctggagaacctgcgcacgcaggggcggatggtgggcatc
gtcacgcacgtggagagcctgtccgagcgcctgcccagccgcctgctggtgaccaagagc
gtggcgggcagcagcgtgcaccgcctggacgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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