KEGG   Dyadobacter fermentans: Dfer_3490
Entry
Dfer_3490         CDS       T00970                                 
Name
(GenBank) UDP-N-acetylmuramoylalanine/D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
dfe  Dyadobacter fermentans
Pathway
dfe00470  D-Amino acid metabolism
dfe00550  Peptidoglycan biosynthesis
dfe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dfe00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Dfer_3490
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Dfer_3490
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:dfe01011]
    Dfer_3490
Enzymes [BR:dfe01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     Dfer_3490
Peptidoglycan biosynthesis and degradation proteins [BR:dfe01011]
 Precursor biosynthesis
  Amino acid ligase
   Dfer_3490
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD_N MurD-like_N AlaDh_PNT_C Pyr_redox_3 3HCDH_N Pyr_redox_2 HI0933_like FAD_oxidored NAD_binding_8
Other DBs
NCBI-ProteinID: ACT94700
UniProt: C6VTT2
Position
complement(4270577..4271947)
AA seq 456 aa
MFNVFKLILVQKKVTILGGGESGAGAAILAKSKGFEVFLSDKGQLHQKYADILNKENIPF
EQGQHSEERILASDLVVKSPGIPDKVPLIVALKEKGILVISEIEFASRYTDAKLIAITGS
NGKTTTTLLTYHLLKTAGLNVGLAGNIGDSFAWAVAEKQFEYYVLEISSFQLDNIIDFHP
YISLLLNITPDHLDRYGYDFQNYVDSKFNIIRNQQASDYFIYYKESEVIQKELEKRNPAV
GRIEVSLDNALEAGSYLENGTLVSKINGNALEIAFAELPVKGPHNAINALSAISVAQLLG
IDPEKIREGLKSFTNAPHRLEQVEVIGGVTYINDSKATNVDSVFYALGSFDQPVILIAGG
VDKGNDYSQIEALVKSKVKGLIVLGKDPVKLETYFAGKVPQIYATDDVRDAVNKGREWGV
PGDVVLLSPACASFDLFKNYEDRGDQFKAAVRNLTQ
NT seq 1371 nt   +upstreamnt  +downstreamnt
ttgttcaacgtttttaaattgattcttgtgcaaaaaaaggtgacgattctgggtggcgga
gaaagtggcgcaggggccgctattcttgcgaaatccaaaggttttgaagtttttttatcg
gataagggccaattgcatcagaaatacgccgacattctgaacaaagaaaatattcccttc
gaacaagggcagcattccgaggagcgcatcctcgcaagcgacctcgtggtgaagagcccg
ggcattcccgataaagtgcccctgatcgtcgcattgaaggaaaaaggcatcctggttatc
tccgaaatcgagttcgcctctcgctataccgacgcgaaactcatcgccattaccggcagc
aacggcaaaacgaccacgaccttactgacttaccacctgctcaaaaccgccggcctgaac
gtcggcctggccggtaacataggcgatagcttcgcatgggccgttgcggaaaagcaattt
gaatattatgtgttggaaatcagtagtttccagcttgataacattatcgattttcaccca
tacatttccctgctcctgaacatcacccccgatcacctcgatcgttatggttatgatttt
cagaattatgtggattcgaaattcaatatcatccgcaaccagcaggccagcgattatttc
atttattataaggaaagcgaggtaatccaaaaagaactggaaaagcgcaatccggcggtc
ggaaggatcgaagtttcgctcgataatgcgcttgaagcaggatcttacctggaaaacggc
acactggtttcgaaaatcaatgggaatgcactcgaaatcgcattcgccgagctgccggtc
aagggcccgcacaatgccatcaatgcattgtcggcgatttcggtagcgcagttgctaggc
atcgatccggagaagatccgtgaaggtttgaagtcgttcaccaatgcgccgcaccgtttg
gaacaggtagaagtgatcggcggtgtgacttacatcaatgattcgaaggccaccaatgtg
gattcggtgttctacgcgctcggtagtttcgaccagccggtgatccttattgcaggcggt
gtggataaaggaaacgattattcacaaatagaagcacttgttaaaagtaaagtgaagggg
ctgatcgttcttggaaaagatcccgtgaaactggaaacttactttgccggcaaagtgccg
caaatatatgcgacggacgatgtccgggatgccgttaacaaagggcgtgaatggggcgtg
ccgggcgatgtcgtgctgctttccccagcttgcgcaagttttgatttgttcaaaaactac
gaggaccgcggcgatcagttcaaagcagccgtcagaaacctcacccagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (52)   

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