KEGG   Desulfovibrio fairfieldensis: AXF13_03280
Entry
AXF13_03280       CDS       T04293                                 
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
dfi  Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:dfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dfi03016]
    AXF13_03280
Enzymes [BR:dfi01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     AXF13_03280
Transfer RNA biogenesis [BR:dfi03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    AXF13_03280
SSDB
Motif
Pfam: UPF0004 Radical_SAM DUF6497
Other DBs
NCBI-ProteinID: AMD89213
UniProt: A0A0X8JI28
Position
complement(757305..758654)
AA seq 449 aa
MTEKSFHIITFGCQMNVHDSLWLARALTARGFTEAPLEEAGVVVVNTCSVREKPEQKVMS
ALGRIRQVTGGNSGVLVAVAGCVAQQLGTAFFERESQVRLVAGSDGISGAPAAIERLLAE
PDLRLSLLDFTSHYVEREPGADGPSGPVAYVNIMQGCDNFCAYCIVPFTRGRQKSRATPA
ILDECRTRLDQGAREITLLGQNVNAFGHDKSGDGVSFAQLLAQVAALPGLERLRFVTPHP
KDMGLEDVAAFAELAPLCPRLHLPLQAGSDAVLTRMRRRYDRRGFLELVDSLRNARPDLA
LSTDLIVGFPGESEEDFQATLEMMEACGFMSSFSFCYSDRPGARAALFPDKIPPEVQQER
LLRLQALQDRLSQRWLDARVDRETCLLIEGRSRKDGPDGESSWQGRDPYGALVHMALPPE
ADHTGRMVPVRIIEAKKHSLMARRAGDIW
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgactgaaaaaagtttccatattatcaccttcggctgccagatgaacgtgcacgattcc
ctgtggctcgcgcgcgccctcacagcgcgcggtttcacggaagcgccgctggaagaggcc
ggggtggtggtggtcaatacctgctcggtgcgcgaaaaaccggaacaaaaggtcatgagc
gcgctggggcggatacgccaggtcacgggcggcaattccggcgtgctggtggccgtggcc
ggctgcgtggcccagcaactgggcacggcctttttcgaacgtgaaagccaggtgcgcctg
gtggcgggcagcgacggcatcagcggcgcacccgcggccattgagcgcctgctggccgaa
ccggatctgcgcctttccctgctggacttcaccagccattacgtggagcgcgagccaggc
gcggacggcccctccggcccggtggcctacgtgaacatcatgcagggctgcgacaatttc
tgcgcctactgcatcgtgcccttcacccgaggccgccagaaatcacgcgccaccccggcc
attctggacgaatgccggacccgcctggaccagggcgcgcgcgaaatcaccctgctgggc
cagaacgtcaacgccttcgggcacgacaagagcggcgacggcgtgagcttcgctcaactg
ctggcccaagtggccgccctgcccggcctggaacgcctgcgcttcgtgactccgcacccc
aaggacatgggtctggaggacgtggccgccttcgcggaactggccccgctctgcccgcgt
ctgcacctgcccctccaggccggttccgacgcggtactcacgcgcatgcggcgcagatac
gaccggcgcggctttctggaactggtggacagcctgcgcaacgcccggccggacctggct
ctttccacggatctgattgtgggctttcccggcgagagcgaggaagattttcaggcgact
ctggagatgatggaagcctgcggcttcatgtccagcttttccttctgttactcggaccgc
cccggtgcgcgggccgcgcttttcccggacaaaattccgcctgaagtccagcaggagcgt
ctgctgcgccttcaggccctgcaggatcggctcagccagcgctggctggacgcccgcgtg
gaccgggaaacctgcctgctcatcgagggcagaagccgcaaggatggcccggacggggaa
agcagctggcaggggcgcgatccctacggcgcgttggtccatatggccctgccgccggag
gcggaccataccgggcgcatggtgccggtgcgcatcatcgaggccaagaagcacagcctc
atggcccgacgggcgggtgatatatggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system