KEGG   Desulfovibrio fairfieldensis: AXF13_09950
Entry
AXF13_09950       CDS       T04293                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
dfi  Desulfovibrio fairfieldensis
Pathway
dfi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AXF13_09950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dfi03021]
    AXF13_09950
   03400 DNA repair and recombination proteins [BR:dfi03400]
    AXF13_09950
Enzymes [BR:dfi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AXF13_09950
Transcription machinery [BR:dfi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AXF13_09950
DNA repair and recombination proteins [BR:dfi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AXF13_09950
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L
Other DBs
NCBI-ProteinID: AMD90413
UniProt: A0A0X8JKG2
Position
complement(2344666..2345709)
AA seq 347 aa
MLIKQGERLINARNWSELVKPDQILREEETASGTHGKFICEPLERGYGTTIGNAMRRVLL
ASLQGAAFVSVKITGVQHEFTTIHGVLEDVTDVILNLKQVRLRLDTDEPQRLILRVDRKG
PVTAAQIQTNQHVEVLNPELHIATLTEDVVLEMELEARMGKGYVPADMHEGLSEEIGLIK
LDSSFSPVRKVAYTVEQARVGQMTNYDRLLLEVWTDGSLTPEDAIAYSAKIIKDQISVFI
NFDERVSGDMRLGSSDGGEVNEHLFKSIDDLELSVRATNCLRSANIALVGELVQRSEGEM
LKTKNFGRKSLDEIKSVLLDMGLDFGMKVDGFDKKYQEWKRKQQNEA
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgcttattaaacaaggcgaacgccttatcaatgcgcgcaactggtcggagctcgtgaag
cccgaccagattttgcgtgaggaagagacggccagcggcacgcacggcaagtttatttgc
gagcctttggagcggggctacggcaccaccatcggcaacgccatgcggcgcgtccttctg
gcctccctgcaaggggcggcctttgtctcggtgaaaatcaccggcgtgcagcatgagttt
accaccatccacggcgtgctggaggacgttaccgacgtcatcctgaatctcaagcaggtc
cgtctgcgcctggacacggacgagccccagcgcctgatcctgcgcgtggaccggaaaggt
ccggtgacggccgcccagatccagactaaccagcatgtggaggtgctcaaccctgagttg
cacatcgccaccctcaccgaggatgtcgtgctggaaatggagctggaagcgcgtatgggc
aagggctatgtgcccgccgacatgcacgaaggtctgtccgaggaaatcggtctgatcaag
ctggattccagtttttccccggtgcgcaaggtggcgtatacggtcgaacaggcccgcgtg
ggccagatgaccaactatgaccgcctgctgctggaagtctggaccgacggctcgctcacg
ccagaggatgccattgcctacagcgccaagatcatcaaggaccagatttcggtctttatc
aattttgatgagcgcgtttccggcgatatgcgtctgggcagcagtgacggcggcgaggtg
aacgagcatctgttcaagagcattgacgatcttgagctctccgtgcgcgccaccaactgc
ctgcgtagtgccaatatcgctctggtgggcgaactggtgcagcgctccgaaggcgagatg
ctcaaaaccaagaatttcggacgcaagtcgctggacgaaatcaaaagtgttcttctggac
atgggccttgactttggtatgaaggtcgacggcttcgacaagaaatatcaggaatggaaa
aggaagcagcaaaatgaggcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system