KEGG   Desulfovibrio fairfieldensis: AXF13_10180
Entry
AXF13_10180       CDS       T04293                                 
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
dfi  Desulfovibrio fairfieldensis
Pathway
dfi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dfi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AXF13_10180
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dfi01007]
    AXF13_10180
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dfi03016]
    AXF13_10180
Enzymes [BR:dfi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     AXF13_10180
Amino acid related enzymes [BR:dfi01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   AXF13_10180
Transfer RNA biogenesis [BR:dfi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    AXF13_10180
 Prokaryotic type
   Other AARSs
    AXF13_10180
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d tRNA_anti_2
Other DBs
NCBI-ProteinID: AMD91580
UniProt: A0A109W584
Position
2378245..2379750
AA seq 501 aa
MLESFAARDDLNEVIKNRVSKACDLLDAGVPLFPNDFHKDHAVSWVLEKFGGLEGDDLEK
QEDVFAIAGRIVSLRSFGKVAFFHLMDQSGRIQCYASREHLDEETYKIVKKLDVGDIVGV
SGHLFRTKTGELTIACRSLKLITRSMRPLPEKYHGLKDMETRYRQRYVDLIVTPRAREIF
AKRSLIVREFRRFMEEHGFMEVETPIMQPLAGGATAKPFKTHHNALDLDLFLRIAPELYL
KRLLVGGFEKVFELNRSFRNEGIDTRHNPEFTMCEFYWAYATFEDLMNFTEKLFAHLAMA
ACGTTVVTYQGQEIDLTPGHWKRLSFHDSLTEIGGHSPDFYNDYSKVRNYIRERGEKAAD
SESLQKLQAKLFDLDVEGKLIQPHFIYHYPTEISPLSRRNDLRPEITDRFELFITGRELS
NAFSELNDPVDQRLRFEEQVREREAGDDEAHSMDEDYLRALEYGMPPAAGQGVGIDRLVM
LLTDSASIREVILFPLLRPEF
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgctggaaagtttcgccgcgcgcgatgatctcaacgaggtcatcaaaaaccgggtcagc
aaagcctgtgacctgctggacgcgggcgtgcccctttttcccaatgatttccacaaagac
catgccgtttcctgggtgctggaaaagttcggcggcctggaaggcgacgacctggaaaaa
caggaagacgtctttgccattgccgggcgcatcgtctctttgcgctccttcggcaaggtg
gccttcttccacctcatggaccaaagcggccgcatccagtgctatgcctcgcgcgagcat
ctggacgaagagacttacaagatcgtcaagaagctggacgtgggcgacattgtgggcgtt
tccggccacttgttccgcaccaagaccggcgaactgaccatcgcctgtcgcagcctcaaa
ctgatcacccgctccatgcggcccctgcccgaaaaataccacggcctcaaggacatggag
acgcgctaccgccagcgctatgtggacctcatcgtcacgccgcgcgcgcgggagatcttc
gccaagcgcagcctgatcgtgcgcgagttccgccgcttcatggaggagcacggcttcatg
gaggtggaaacccccatcatgcagcccctggccgggggcgccacggccaagccgttcaaa
acccaccataacgcgctggacctggatctttttctgcgcatcgcgccggagctctacctc
aaacgcctgctggtgggcggctttgaaaaagtctttgagctgaaccgcagtttccgcaac
gaaggcatcgacacccgccacaatccggaattcaccatgtgtgaattctactgggcctac
gccacgtttgaagatctcatgaacttcacggagaagctcttcgcccatctggccatggcg
gcctgcggcaccacggtggtgacatatcagggccaggaaatcgacctcacgcccggccac
tggaagcgcctcagcttccacgactcgcttacggaaatcggcgggcattcccctgatttt
tacaatgattacagcaaagtgcgcaactatatccgcgagcgcggcgaaaaggccgcagac
agcgaaagcctgcaaaaactccaggccaagctctttgacctggatgtggaaggcaagctg
atccagccgcatttcatctatcattatcccacggaaatctcgcccctctcccgccgcaac
gacctgcggccggaaatcacggaccgctttgaactgttcattaccggacgcgagctgtcc
aacgccttttccgagctcaatgatcccgtggaccagcgcctgcgctttgaagagcaggtg
cgcgaacgggaagccggcgacgacgaagcccacagcatggacgaggactatctgcgcgcc
ctggaatacggcatgcccccggcggcgggacagggcgtgggcatcgaccgcctggtcatg
ttgctcacggattcggcttccatccgcgaggtcattctctttcctctgctgcggccggag
ttttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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