KEGG   Desulfovibrio fairfieldensis: AXF13_12340
Entry
AXF13_12340       CDS       T04293                                 
Name
(GenBank) tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
dfi  Desulfovibrio fairfieldensis
Pathway
dfi04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:dfi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    AXF13_12340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dfi03016]
    AXF13_12340
Enzymes [BR:dfi01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     AXF13_12340
Transfer RNA biogenesis [BR:dfi03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    AXF13_12340
SSDB
Motif
Pfam: ThiI tRNA_Me_trans NFACT-R_2 QueC
Other DBs
NCBI-ProteinID: AMD90848
UniProt: A0A0X8JL96
Position
2923091..2924188
AA seq 365 aa
MTATPDVIVLFSGGLDSILAAKLLEDQGLKVRCLHCVSPFFGDEAALPRWRRLHNLDIAS
LDVSEDFAALLRRRPVHGFGKVMNPCVDCKILLLRHARLYMEAVGARLLASGEVLGQRPM
SQRRDTLHVIPRDADVTGLLLRPLCARLLAPIPAEENGLVDRTRLLSISGRGRGEQLALA
ERFGLQEIPTPGGGCRLTERENARRYWPVLTRRADAAPSLARDFALANLGRQFWRQDDGR
DYWLSVGRNNTDNKRLAAAAGPDDALLSLTGLPGPLGLARHGATWPRPLLEEAAALTASY
APKAVAVGGLTALRASWKNSALELAVPPQRAGTPWSEPSWEEVRAEIREEARLRREMPPR
AAPGA
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgactgcaacgccggacgttatcgtacttttttccggcggcctggacagcatcctggcc
gccaagctgctggaggaccagggcctgaaggtgcgctgcctgcactgtgtctcgcccttt
ttcggggatgaagccgcgttgccgcgctggcggcggctgcataatctggacatcgccagc
ctggacgtcagcgaggatttcgcggccctattgcgccgccgccccgttcacggtttcggc
aaggtcatgaacccctgcgtggactgcaagatcctgctgctgcgccacgcccgcctgtac
atggaggccgtgggcgcgcgcctgctggcctcgggcgaggtgctgggccagcgccccatg
tcccaacgccgcgacaccctgcatgtgatcccgcgcgacgcggacgtgaccggcctgctg
ctgcgcccgctctgcgcccggctgctggcccccatcccggccgaggaaaacggcctggtg
gaccgcacacgcctgctgtccatttccgggcgcgggcgcggggaacaactggccctggcc
gagcgcttcggccttcaagaaattcccacgcccggcggcggctgccgcctgaccgagcgg
gaaaacgcccggcgctactggcccgtgctcacgcgccgcgccgacgccgcgccgtccctg
gcgcgggatttcgccctggcgaatctggggcggcaattctggcggcaggacgacgggcgc
gactactggctcagcgtgggccgcaacaacacggacaacaagcgcctggcagcggccgcc
ggaccggacgacgccctgctcagcctgacgggcctgcccggccctctggggctggcacgc
cacggcgcgacttggccgcgtcccctgctggaggaagccgccgccctgaccgcctcatat
gcccccaaggccgtggccgtcggcggactcaccgccctgcgcgcttcctggaagaacagc
gccctggaactggccgtcccgccgcaacgcgcgggcacgccctggtccgagccttcctgg
gaagaggtgcgggccgaaatccgggaagaagcgcgcctcaggcgggaaatgccgccccgt
gccgcccccggggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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