KEGG   Desulfovibrio fairfieldensis: AXF13_13230
Entry
AXF13_13230       CDS       T04293                                 
Name
(GenBank) RNA methyltransferase
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
dfi  Desulfovibrio fairfieldensis
Brite
KEGG Orthology (KO) [BR:dfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dfi03009]
    AXF13_13230
Enzymes [BR:dfi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     AXF13_13230
Ribosome biogenesis [BR:dfi03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    AXF13_13230
SSDB
Motif
Pfam: Methyltr_RsmB-F FtsJ Methyltransf_23
Other DBs
NCBI-ProteinID: AMD91625
UniProt: A0A109W592
Position
3145455..3146738
AA seq 427 aa
MPKQHSRSFRLVCETRHIPLVEALLRAQGYEFEPEPFSPLCRRLCREPRPLGGSLAAFFG
YIYIQDRSSMLPPLALAPRTGEAVLDVCASPGSKSGFLAQLTGPTGFVLANEPAPARLGT
LRANLHQCNLLQAATCSYGGENLPLVPASWNAIQLDPPCSGWGTAEKHPRVLKLWQGDKL
NSLIGLQRRLLRHAASLLAPGGRLVYSTCTTNEAENEAQVCFAEEELGLVRETLPPFPGF
AWEERSDGAGTLRVDGEKSRAQGFYLALLRKTASSAGTPPVPPASAPEKRGARREAGRTL
PPDCLAGPCCDPALLPPGHAALYGEHVRFIPAQAVGLLPPECIWQGALLGRLTGGRLSPA
PRLRCLLPEPPGPDTALVLDDLADLAALLSGQSRQTGLAGREAGLWWRDLPLGRIALKQG
RAVAVFK
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgcccaaacagcactctcgctccttccgtctggtctgcgaaacccggcacatccccctg
gtggaagccctgctgcgcgcccaaggctacgaattcgaacccgagcccttttccccgctc
tgccgccgcctctgccgcgagccccggcctctgggcggttccctggcggcctttttcggg
tatatctacatccaggaccgctcctccatgctgccgcccctggcgctggccccccggacg
ggggaagccgtgctggacgtctgcgccagcccgggcagcaaaagcggctttctggcccag
ttgaccggccccacgggctttgtgctggccaacgagcccgcgcccgcccgcctgggcacc
ctgcgggccaatctgcaccagtgcaatctgctccaggccgccacctgctcctacggcggc
gaaaacctgcccctggtcccggcttcctggaacgccatccagctggacccgccctgctcc
ggctggggcacggcggaaaaacatccccgcgtgctcaagctctggcagggagacaaactg
aacagcctcatcggcctgcaacgacgtctgctgcggcacgccgcatccctgctcgcgccg
ggcggacggctggtctactccacctgcaccaccaacgaggcggaaaacgaggcccaagtc
tgtttcgccgaagaagagttgggccttgtgcgtgaaacgctgccgccgtttcccggcttt
gcctgggaagaacgctccgacggcgcgggcacgctgcgggtggacggtgaaaaatcgcgg
gcccagggattttacctggccctgttgcgcaagacggcgagcagcgcgggcacgcccccc
gtgccgcccgcgtccgccccggaaaaacgcggcgcgcggcgcgaagcgggccggaccctg
ccgccggactgcctggccgggccctgctgcgacccggctctgctgccgccgggccacgcc
gcgctttacggcgagcatgtgcgttttattcccgcacaggcggtcggtctgctgccgccg
gaatgcatctggcagggagccttgctgggccgcctgaccggcggccgcctgagcccggcc
ccgcgcctgcgctgcctgctgcccgagccgcccggaccggacacggccctggtgctggac
gaccttgcggacctggcggccctgctttcgggccagagccgccaaaccggcctggcgggc
cgtgaggccggactctggtggcgcgatctgcccctggggcggatcgcgctcaaacagggc
cgggccgtggccgtgttcaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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