KEGG   Dehalogenimonas formicexedens: Dform_01880
Entry
Dform_01880       CDS       T04654                                 
Symbol
rsgA|engC
Name
(GenBank) ribosome biogenesis GTPase
  KO
K06949  ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
Organism
dfo  Dehalogenimonas formicexedens
Pathway
dfo00730  Thiamine metabolism
dfo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dfo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    Dform_01880 (rsgA|engC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dfo03009]
    Dform_01880 (rsgA|engC)
Enzymes [BR:dfo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     Dform_01880 (rsgA|engC)
Ribosome biogenesis [BR:dfo03009]
 Prokaryotic type
  GTPases
   Dform_01880 (rsgA|engC)
SSDB
Motif
Pfam: RsgA_GTPase MMR_HSR1 ABC_tran GTP_EFTU FeoB_N AIG1 Dynamin_N RsgA_N nSTAND1 AAA_29
Other DBs
NCBI-ProteinID: APV45198
UniProt: A0A1P8F9S9
Position
complement(1788909..1790147)
AA seq 412 aa
MRPPFSPPARAADLFWAGVNRVLLSPVFESDRYFEHRGIHFACLSLYNVRMNYSFDSWLK
QLGWNTYFQANYETMQTTGTIPARVSSESKGLYQLLTPQGEMSARLTGKMRYEQAPATIF
PAVGDWVMAMPIAGEDKAMIHAVLPRKSKFSRKVAGECAAEQVVAANVDFVFIVSGLDGG
RSFNLRRIERYLTLAWNSGAVPVVILNKADMVESVETFIQEVEGIAPGVSVHPVSARTGA
GLEALLAYLTEGSTIGFLGSSGVGKSALINALLGKNKQAVGDVRLDDRMGRHTTTRRELI
PLPGGGIVIDTPGMREIQMWGADSDLDGVFSDISQIAEDCRFKDCSHTSETGCAVLAAVE
RGDLDPARLENYRKLQKELEYVGAREADSARQYEKMKFKPIAKLVKQLYKER
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgcgtcctcccttttcgccgcccgcaagggcggcggatttattttgggcgggggtaaat
agggtgttgttgtcgccggtttttgagtccgaccgttatttcgaacaccggggaatccat
ttcgcttgtctgtcgttatataatgtgcgaatgaactactcttttgatagttggctaaaa
caattgggttggaatacgtatttccaggccaactatgagaccatgcaaacaaccggaaca
atacccgccagggtcagttcagaatccaagggtttgtaccagttattgaccccgcagggt
gaaatgtccgcccggctgaccggcaagatgcgatacgagcaggcccctgccaccattttt
cctgcagtcggggattgggtgatggcgatgccgatagctggtgaagacaaagccatgatc
catgccgtattgccgcggaagagtaagttttcgaggaaagtcgccggagaatgcgccgca
gagcaggtggttgccgccaatgtcgattttgtgttcattgtcagcggcttggacgggggc
agaagttttaatcttagaagaattgaacgctacctgacccttgcctggaacagcggcgcc
gtccctgtcgtcatcctgaataaagccgatatggttgaaagcgttgaaacttttatccaa
gaggtcgaaggaatcgccccgggggtctcggtccacccggtcagtgccaggaccggagcg
gggttggaagcccttctggcgtacctgacggaagggagcacgatcggttttttggggtcg
tcgggtgtcggcaagtctgctctcatcaacgcgttgctcggcaagaacaagcaagcggta
ggagatgtgcgactcgatgaccggatgggccggcacaccactacccgccgcgaattgata
cccctgcctggcggtggcatcgtcatcgacacacccggtatgcgagagatccagatgtgg
ggcgctgatagtgacctcgacggtgttttttccgatataagccaaatcgccgaggactgc
cgtttcaaggattgcagccatacctcggagaccggttgcgccgtgcttgcggcggtcgag
cggggagacctggatccggccaggctggagaattaccgcaagttgcagaaagaacttgaa
tacgtcggcgcacgggaagcggatagcgcccgccagtacgagaagatgaaatttaagccg
atcgctaagcttgttaaacagctctataaagaacggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (28)   

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