KEGG T00353: Dgeo

Deinococcus geothermalis: Dgeo_1777

Entry

Dgeo_1777         CDS       T00353

Name

(GenBank) (Uracil-5)-methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

dge Deinococcus geothermalis

Brite

KEGG Orthology (KO) [BR:dge00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dge03009]
    Dgeo_1777
Enzymes [BR:dge01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Dgeo_1777
Ribosome biogenesis [BR:dge03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Dgeo_1777

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_12 Cons_hypoth95 Methyltransf_11 Ubie_methyltran

Other DBs

NCBI-ProteinID:

ABF46072

UniProt:

Q1IXG2

Position

1893180..1894412

AA seq 410 aa
MPDVLLTLEIEKLVAGGLGLARDGSGVVLVRGALPGERVEAEVRTGRGVRQGVTRTVLRA
SPDRVSAPDLPTLDLAHAAYPAQLVYKRGFVEEALARIAKLRHPVAPTLPSPHEWHYRNT
AQYLVTPRGLAYRERRGRDPLVVGRDPLVMAPIQAVMDRLDPERLNPATEVAFRASRLTG
EVVAALIGAGEPRHFLRASDHLLDAGVVGVSLAEPAGRRFGAGVRLIAGEAEIQEQFGQV
RVGITATGFAQVNPEAAGLAYIHAAELAGSGLHAVDLYGGSGAIGRHLAPHFARVTVLDT
AAEALVRGRQAVAVSGERNVSYRSGDAARLGELSTDVIVVDPPRAGLDEGARDHIHASTA
DRLVYVSCDPATWARDVGDLTRRGWRLGEVTPHDFYPQTSHVEVVSVLER

NT seq 1233 nt +upstreamnt +downstreamnt
atgcccgacgttctgctcacgctggaaatcgaaaaactggttgccggggggctgggcctc
gcccgcgacgggtccggcgtggtgctcgtgcgtggggcgctgcccggcgagcgggtggag
gccgaagtccgcaccggccggggtgtgcgccaaggggtgacccgcacggtgctgcgcgcc
agccccgaccgggtgtccgcccccgacctccccacgctggacctcgcccacgcggcctac
ccggcgcaactggtttacaagcgcggcttcgtggaggaggccctcgcgcgcatcgccaag
ctgcggcacccggttgccccgacgctgcccagcccccacgagtggcactaccgcaacacg
gcccagtacctcgtgacgccgcgcggccttgcctaccgcgagcggcggggccgtgacccc
ctggtggtgggccgggatccgctggtgatggcgcccatccaagccgtgatggaccgcctc
gacccagagcgcctcaaccccgcgaccgaagtggccttccgcgccagccgcctcaccggg
gaggtggtggcggcgctgatcggcgcgggcgaaccccgccacttcctgcgtgcgtccgac
cacctgctcgacgctggggtggtgggcgtcagcctcgcggaacctgccgggcggcgcttc
ggggcaggcgtgcgcctcatcgcgggcgaggccgagatccaggaacagttcggacaggtg
cgggtgggcatcaccgcaaccggctttgcacaagtgaaccccgaagcggcgggactggcg
tatatccacgcggcagaactggcgggaagcggcctacacgccgtagacctctacggcggt
tcgggcgctatcgggcggcacctcgcgccccacttcgcgcgggtcacggtccttgacacg
gcggcagaagcgctcgtgcgggggcggcaagccgtcgcggtcagtggcgagcgcaacgtc
agctaccgcagtggcgatgcggcccgcctcggcgagctgagcaccgatgtcatcgtggtg
gacccgcctcgcgcgggcctcgacgaaggcgcgcgggaccatatccacgccagcaccgcc
gaccgcctggtctacgtgagctgtgatccggcaacctgggcgcgcgatgtgggcgacctc
acccggcgcggctggcggctgggcgaggtcacgccacacgacttctacccccagaccagc
catgtggaagtcgtgagcgtgctggaacgctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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