KEGG   Deinococcus geothermalis: Dgeo_3110
Entry
Dgeo_3110         CDS       T00353                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dge  Deinococcus geothermalis
Brite
KEGG Orthology (KO) [BR:dge00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dge02048]
    Dgeo_3110
Enzymes [BR:dge01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Dgeo_3110
Prokaryotic defense system [BR:dge02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Dgeo_3110
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD AAA_16 SNF2-rel_dom ING
Other DBs
NCBI-ProteinID: ABW35149
UniProt: A8ZRP0
Position
pDGEO02:200767..203709
AA seq 980 aa
MSTLKISEAGTVQFPMVEHAVEIGWTSITPEDARTKRGGEAGTFFRDVLEAKLAAFNPWM
SANAVRSVVETLDALPASIEGNRERLAWLRGERSWFDEQEKRHRRVHLIDFEHVTDNAFH
VTWEWKIKPPARKGNRADVMFLVNGVPVCIVEHKNPKDGDAIERAVKQLRRYELETPELL
ACPQLFNVTHLLDYWYGVTWNANRRDMARWKQAPEETYRFAVQSFFEPTDFLRTLRHWIL
FYVQDGETRKSVLRQHQRRAIDAILNRCADPTKTRGLIWHTQGSGKTFTLLTAARLILED
KARFANATVILVVDRTELEGQLKGWVERLLGEMQSQDIAVRRANNKAELQSLLDADFRGL
ILSMIHKFEAIRKDSVLRDNVYVFIDEAHRSVAKDLGTYLMAAVPKATIIGFTGTPIART
AQGEGTFKIFGTQDELGYLDKYSIAESIADETTLPIKHVMAPSEMTVPAERLDKEFFALA
ESEGMTDVEELNKVLDRAVGLRTFLTADDRIEKVSAFIAEHFKENVLPLGYKAFVVAVNR
EACAKYKKALDKLLPPEWTAPVYTENSADVVDRPLVAELQLSDEQEEQVRLLFKKPAENP
KILIVTDKLLTGYDAPPLYCLYLDKPMRDHVLLQSIARVNRPYVDANGVQKRVGLVVDFV
GVLRELKKALQFDSSDVSGVIEDLDVLLQDCLQRIEQAKKDYLETDASGTPDERLERLVF
GRFLTPEARKTFFEHYKEIEALWEILSPDPQLRDHIATYKQLSQLYAAVRNAYAEKVGFV
ADLAYKTRRLIEESAEQHGLGRLTKTVTFDVATLKSLRGEKGSDEGKVFNLVRGLQHEID
EDPVAAPVLQPLKDRAERILKDLEERKTTGLAAMDQLAALAAEKEAAMKAARDSGLSPRA
FAVAWALREDAAIKAAGIDLMTLAKDAEDLLGRFPNASVNTDEQRRLRASLYKPLLALAP
DERARIVDLVVRQLLTEGSE
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgagcacgctcaagatcagcgaagccggcaccgtgcaattcccgatggtggaacacgcg
gtggagatcggctggacttcaatcacgccggaggacgcacgcaccaagcgcggcggcgag
gcgggcaccttcttccgcgacgtgctggaagccaagctcgccgcgttcaacccttggatg
tccgccaacgcggtgcgctccgtggtggaaaccctggacgcgctgccggccagcatcgag
ggcaatcgcgagcgcctggcctggctgcgaggggaacgctcctggttcgacgaacaggaa
aagcgccatcgacgcgtccacctcatcgacttcgagcacgtgacggacaacgcctttcac
gtcacctgggaatggaagatcaagccgcccgcgcgcaagggcaaccgggccgacgtgatg
ttcctggtcaacggcgtgccggtgtgcatcgtcgagcacaagaacccgaaagacggcgac
gctatcgagcgcgccgtcaagcaactgcgccgctacgagctggaaacgccggagctcttg
gcatgcccgcaactcttcaacgtcacccacctgctcgactattggtatggcgtgacctgg
aacgccaaccggcgcgacatggcgcgctggaagcaggcaccggaggaaacctaccgcttt
gcggtgcaatcctttttcgagccgaccgacttcctgcgcacgctgcggcactggatcttg
ttctacgtgcaggacggcgagacccgcaagtcggtgctgcgccagcaccagcggcgcgcc
atcgacgccatcctgaaccgctgtgccgacccaaccaagacaaggggcctcatctggcac
acccagggctcgggtaagacctttacgctgctgaccgccgctcgcctgatcctggaggac
aaggcgcgcttcgccaacgcgacggtgattctggtggtggaccgcaccgagctggaaggc
cagttgaagggctgggtggagcgcctgctgggcgagatgcagagccaggacatcgcggtc
aggcgcgccaacaacaaggccgaacttcagtccctgctggatgccgacttccgcggcctg
atcctctcgatgatccataagttcgaggccatccgcaaagacagcgttctgcgcgacaac
gtctacgtattcatcgacgaagcgcaccgatcggtcgccaaggacctcggcacctacctg
atggcggccgtacccaaggccacaatcatcggcttcaccggcacacccatcgcgcgtacg
gcgcaaggcgaaggtacgttcaagatcttcggcacgcaggacgagcttgggtatctcgac
aagtactccatcgccgagagcatcgccgacgagacgaccctgccgatcaaacacgtgatg
gcgcccagcgagatgacggtgcctgccgaacggctggacaaggagttcttcgcgctggcc
gagagcgaaggcatgaccgatgtcgaggaactgaacaaggtgctcgaccgcgcggtgggc
ttgcgcaccttcttgacggcggacgaccgcatcgagaaggtgtcggccttcatcgccgag
cacttcaaggagaacgtgctgcctctaggctacaaggccttcgtggtggcagtgaaccgc
gaggcctgcgctaagtataagaaggcgctggacaagctgctgcctcctgagtggaccgcg
ccggtctacacagagaactccgccgatgtggtggaccgaccgctggtggccgagttgcag
ctgtcggacgaacaggaagaacaagtccgcctgctgttcaagaagcctgccgagaacccg
aagatcctgattgtcaccgacaagctgctcaccggctacgacgcgccgccgctttactgc
ctgtacctcgacaagccgatgcgcgaccacgtgctgctgcagtcgattgcgcgtgtgaac
cgcccttatgtagatgccaacggcgtgcagaagcgggtgggcctcgtggtggacttcgtc
ggcgtgctgcgcgagctgaagaaggcgctgcaattcgattccagcgacgtcagcggtgtg
atcgaggatttggatgtgctgctgcaggactgcttgcaacgcatcgagcaggccaaaaag
gactacctcgagacggacgccagcggtacgcccgacgagcggctggagcgtctggtgttc
ggccgcttcctgacgcctgaggcgcgcaagaccttcttcgagcactacaaggagatcgag
gcgctgtgggaaatcctctcgcccgaccctcagctccgtgaccacattgcgacctacaag
cagcttagtcagctctatgcggccgtgcgcaatgcctacgccgaaaaagttgggtttgtg
gctgacctagcctacaagacgcggcgactgatcgaggaaagcgcggagcaacatggtctt
gggcgattgactaagactgtgacctttgatgtggcaaccttgaagtcgctgcgcggtgag
aaaggttccgacgagggcaaggtgttcaacctggtgcgcgggctgcagcacgagatcgac
gaggaccctgtggcagcgccggtgctgcaaccgctgaaagatcgtgccgagcgcatcctg
aaggatctggaagagcgcaagacgaccggtctggcggcgatggaccaactggcggcgttg
gcggcggagaaggaagcggccatgaaggcggcgcgcgacagcggcctttcgccccgcgcc
tttgccgtcgcctgggcgctgcgtgaggacgcggccatcaaggccgcgggcatcgacctc
atgacgttggccaaggacgccgaagacttgctcgggcgtttcccgaatgcctcggtcaac
accgatgaacagcgacggctgcgggcctcgctctacaagcccttgctggccctggccccg
gacgagcgggcacggatcgtcgatctggtggtgcggcagctgctcacggagggcagcgaa
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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