KEGG   Desulfoscipio gibsoniae: Desgi_1004
Entry
Desgi_1004        CDS       T02657                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dgi  Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:dgi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dgi02048]
    Desgi_1004
Enzymes [BR:dgi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Desgi_1004
Prokaryotic defense system [BR:dgi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Desgi_1004
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII
Other DBs
NCBI-ProteinID: AGL00542
UniProt: R4KFX1
Position
complement(1026603..1029836)
AA seq 1077 aa
MKNRITENAIEEFAIELLEKAGYQYIYAPDIAPDSATPERQSFEEVLLLDCLQTAVGRIN
PKMPADVREDAIKQIQRLNSPELITNNEAFHRMLTEGIKVSYQKDGNERGDYVWLIDYKN
PDNNDFIVTNQFTVIEKGVNKRPDIILFVNGLPLVVIELKNPADENATVKSAYKQLQTYI
QAIPNLFTFNAIMVISDGLEAKAGSLSAGLSRFMTWKSSDGKIEASHLIGQLETLLKGML
NKETLLDLIRHFIVFEKSKKEDKKTGIITIQTVKKLAAYHQYYAVNRAVESTLRAAGYSF
ISGKHSLSIVMESPESYGVAGVKQQPVGDRKGGVVWHTQGSGKSLSMVFYTGKIVLAMNN
PTVVIITDRNDLDDQLFDTFASSKQLLRQDPVQAEDREHLKELLKVASGGVVFTTIQKFQ
PDEGNVFEQLSVRENIIVIADEAHRTQYGFKAKTIDDRDEQGTVIGKKIVYGFAKYMRDA
LPNATYLGFTGTPIESTDINTPAVFGNYIDVYDIMQAVDDGATVRIYYESRLAKINLSEE
GKKLVADLDEELDKDGLTETQKAKAKWTQLEALIGSADRVKQVARDIINHFEQRQEVFEG
KAMIVSMSRRIAADLYDEIIKIKPQWHSADLKKGVIKVVMTSNSSDGPEISKHHTTKEQR
RALADRMKDPEDDLKLVIVRDMWLTGFDVPSMHTLYIDKPMKGHNLMQAIARVNRVYKDK
PGGLVVDYLGIASDLKKALAFYSNSGGKGDPAISQEKAVQFMLEKIEVVAQMYHGFAYEN
YFDADTSTKLSIILAAEEHILGLVNGKKRYIDEVTALSKAFAIAIPHEQAMDVKDEVSFF
QAVKSRLAKFDSTGAGKTNEEMETAIRQVIDKALITEQVIDVFDAAGIKKPDISILSEEF
LLEVKNMEHKNVALEVLKKLLNDEIKSRTKKNLIQSKALMEMLENSIKKYHNKILTAAEV
IEELIALGKDIQKMDKEPQEMGLSEYEYAFYTAIANNESARELMQKDKLRELAVVLFEKV
KENASIDWTIKESVKAKLKVIVKRTLRKYGYPPDMQKLATETVLKQAELIAEELTHK
NT seq 3234 nt   +upstreamnt  +downstreamnt
gtgaagaatagaataactgagaatgcaatagaagaatttgccattgagctgttggagaaa
gctggctaccaatacatctacgccccggatatcgcgcccgacagtgctaccccggagagg
caatcctttgaagaggtactgttgctggattgtctacaaacagccgttggcagaataaac
cctaaaatgccggcagatgttcgggaagatgccataaaacaaatacagcgtttaaattca
cctgaactgataaccaataacgaagcgtttcaccgaatgcttaccgaagggatcaaagta
agctatcagaaagacggaaatgaaagaggggattatgtctggctgattgattataaaaac
ccagacaataacgattttattgttaccaatcaatttacggtaatcgaaaaaggagtaaat
aagcgcccggatattattctttttgtaaacggtttgccgttggtcgtgatcgaactgaaa
aatcccgcggatgaaaatgcaacagtaaaatcggcatacaaacaattacaaacctacata
caagccatcccgaacctcttcaccttcaatgccatcatggttatttccgatggtctggaa
gcaaaagcaggttcactttctgccggtttaagccgctttatgacatggaaatcatctgac
ggaaaaattgaagcatctcatcttatcgggcaactggaaactctacttaaaggcatgctt
aataaggaaacattgttagacctgatccggcattttatcgtatttgaaaaatccaaaaaa
gaagataagaaaaccggcatcatcaccatccaaacggtcaagaaattagcggcctatcat
caatattacgcagtaaacagagcggtagaatccacattgagagccgcaggatattctttc
atatctggaaagcatagtttaagtattgtaatggaatcacctgagagttatggtgtcgcc
ggggtaaagcaacaaccggtcggagaccgtaaaggcggcgtggtctggcatacgcaggga
agcggaaaatcattatcgatggtattttataccggaaaaattgtactcgccatgaataac
ccaaccgtagtaattataacagaccgaaacgatttggacgatcagttgtttgataccttt
gcgtcttcaaaacaacttctcagacaagaccccgtgcaggcagaagacagagaacacctg
aaagaacttctaaaagttgcctcgggcggcgtggtttttacaaccattcaaaagtttcaa
ccagatgaaggcaatgtttttgagcagctttcagtcagggaaaatatcattgtcatagca
gatgaagcgcataggacacaatatggttttaaggcgaaaacaattgatgatagggatgaa
caaggaactgtaatcggtaaaaaaattgtctacggtttcgcaaaatatatgcgtgatgcc
ctgcccaatgccacctatcttggttttacgggaacgccgattgagagcacagatataaat
accccggctgtatttggtaattacattgatgtctacgatataatgcaggccgttgatgat
ggagcaaccgtaaggatttattacgaaagcagattggctaaaatcaatctcagtgaagaa
ggtaaaaagctggttgctgatttggacgaagaattggataaggatggtttgacagaaact
caaaaagctaaggcgaaatggacgcaactggaagctttgatcggaagtgccgatcgcgta
aaacaggttgcccgggatattattaatcattttgaacaaagacaggaagtatttgaaggc
aaggcaatgattgtgtccatgtccagaaggattgccgccgacttgtatgatgaaataatt
aaaatcaaaccacagtggcacagtgctgatttaaaaaaaggtgtcattaaagtggttatg
acttctaattcttccgatgggccggaaatttcaaaacatcacacgacgaaagaacagaga
agagcactggctgacaggatgaaggacccggaagatgatttgaaactggtcattgtccgg
gatatgtggcttaccggttttgatgttccttcaatgcataccctgtacatcgataagcct
atgaaaggccataacctgatgcaggccattgccagggttaacagggtatataaggacaag
cccggtggtttggtggtggattatcttggcattgcatcagacctgaaaaaagctctggct
ttctattctaacagtggaggaaaaggcgaccctgcaattagccaggaaaaagcagtgcaa
tttatgttggaaaaaatagaagttgttgcgcagatgtaccatgggtttgcttatgagaat
tattttgatgcggatacatcaacaaaattatcgattatcctggcagcagaggagcatatt
ctgggcctcgtaaacggtaaaaaaagatatattgatgaggtaacggccttatccaaagct
tttgccattgctattccacatgaacaggcaatggatgtgaaagatgaagtttcttttttt
caagctgttaagtccagattggcaaagttcgacagcaccggcgcaggtaaaacaaacgaa
gaaatggaaaccgccatcaggcaggttattgataaagccctgataaccgagcaagtgatc
gatgtttttgatgcggcgggtattaaaaaaccggatatttccatactttcagaagaattt
cttttggaagttaaaaatatggagcataaaaatgttgctcttgaagtccttaagaaatta
ctcaatgatgagataaaatcaagaactaaaaagaacctgattcagagcaaagctttgatg
gaaatgttggagaattcaattaaaaaatatcacaacaagatcttaacagcggcagaagtt
atcgaagaattgattgcacttggtaaagatattcaaaaaatggataaagagcctcaagaa
atgggtttgtcggaatatgaatatgctttttatacagccattgccaacaatgaaagcgcc
agggaattaatgcaaaaagataaattgagggaactggctgttgtattatttgaaaaagtg
aaagaaaatgcatcaatagactggacaataaaagaaagcgtaaaagcaaaattaaaagta
atcgtaaagcgcactttaaggaaatatggttatccgccggatatgcagaaacttgcaaca
gaaacagtattgaaacaggctgaactgattgcagaggaattaactcataaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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