KEGG   Desulfoscipio gibsoniae: Desgi_1995
Entry
Desgi_1995        CDS       T02657                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
dgi  Desulfoscipio gibsoniae
Pathway
dgi00470  D-Amino acid metabolism
dgi00550  Peptidoglycan biosynthesis
dgi01100  Metabolic pathways
dgi01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:dgi00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Desgi_1995
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Desgi_1995
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Desgi_1995
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:dgi01011]
    Desgi_1995
Enzymes [BR:dgi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Desgi_1995
Peptidoglycan biosynthesis and degradation proteins [BR:dgi01011]
 Precursor biosynthesis
  Amino acid ligase
   Desgi_1995
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_3 ATPgrasp_ST ATP-grasp RimK ATP-grasp_4 GARS_A TTL SfsA ATPgrasp_YheCD
Other DBs
NCBI-ProteinID: AGL01439
UniProt: R4KFQ7
Position
complement(2041516..2042451)
AA seq 311 aa
MGPKIGVLLGGRSAEREVSLRTGEAIHRALLSIGYDAVKIDVDNNIVENLKAQQIELAFI
ALHGKYGEDGTVQGLLEMLDIPYTGSDVLASAIAINKIATKKILLYEGLPTPEFFTVSRS
QYSNDAMDTIAEKIIAMGLPVVVKAATQGSTIGISFVRHRDDINSAIEQAFQYDPNVLVE
KMVDGVEVTASVLGNENPQVLPLIEIFSTTGVYDYTAKYTVGLSDHIIPPRLPDDVQQNI
KELAYKAYLAIGCRGLSRVDFMVDQSGHPYVLEVNTIPGMTETSLFPDAARAAGISFEAL
VGKIVELAMEK
NT seq 936 nt   +upstreamnt  +downstreamnt
atgggccccaaaatcggtgttttactgggcgggcgttcggcggaaagggaagtatcattg
cgcactggagaagcaatccaccgggcattactgtccattggttatgatgcggtaaaaatc
gatgtagataataacatagtggaaaatttaaaagcccagcaaattgagctggcttttatc
gccctgcatggcaaatatggtgaagatggcaccgttcaaggtctattggagatgctggat
ataccttataccggatccgatgtattggcaagtgccattgccataaataaaattgccact
aaaaagatattattatacgaaggattacccactcccgaattctttaccgtatcacgcagc
cagtacagcaatgacgcaatggataccatcgccgaaaaaatcatagctatgggtttgcct
gtggtggtaaaagcagccacccagggttcaaccatcggcatctcatttgttcgtcacagg
gatgatataaacagtgccatcgagcaggcttttcagtacgatcccaatgtactggtggaa
aaaatggtggatggtgtagaggtaactgcctctgtgctgggcaatgagaatccccaagta
ctgcctttaattgagattttttcgaccacaggggtctatgactatacagccaagtacact
gtaggattaagcgaccatattataccgccccggctgccagatgatgtacaacaaaatata
aaagaactggcttataaagcatacctggccattggctgccggggactgtcacgagtggat
ttcatggtagaccaatccggtcatccttatgttttagaagtcaacaccatacccggcatg
acagagaccagcctatttcctgacgcggcaagggcggcgggcatatcatttgaagcattg
gtaggcaaaatagtagagctggccatggaaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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