KEGG   Desulfoscipio gibsoniae: Desgi_2136
Entry
Desgi_2136        CDS       T02657                                 
Name
(GenBank) formate dehydrogenase, alpha subunit, archaeal-type
  KO
K05299  formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
Organism
dgi  Desulfoscipio gibsoniae
Pathway
dgi00680  Methane metabolism
dgi01100  Metabolic pathways
dgi01120  Microbial metabolism in diverse environments
dgi01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:dgi00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    Desgi_2136
Enzymes [BR:dgi01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.10  formate dehydrogenase (NADP+)
     Desgi_2136
SSDB
Motif
Pfam: Molybdopterin Molydop_binding Fer2_4 NADH-G_4Fe-4S_3 Molybdop_Fe4S4 Fer4_7 Fer4_10 Fer4 Fer2 Fer4_21 Fer4_8 Fer4_6 Fer4_9 Fer4_2 Fer4_17 Fer4_16 Fer4_18
Other DBs
NCBI-ProteinID: AGL01569
UniProt: R4KG57
Position
complement(2189761..2192454)
AA seq 897 aa
MTVAEVTLTINGISVTVPKGTTVLEAARQAGVFIPTFCHDPELTKFGACRMCVVEIPGMR
NLPASCVTEATDGMVVHADSPAVQEARKVILELMLANHPMDCLTCGKNGDCRLQDYAYMY
GVKTEPFEGEKHSYPLEDDNPFIVRDMNKCILCGKCVRACAEIQGKSIVDFAYRGFDAKI
TPAMDVPLSASECVFCGNCVAVCPVGALQEKGLRAAARTWEVQKVKTTCPYCGTGCSFEL
NVKDNKVVGVTSCDGDVNGRALCVKGRFGYGFIHHPDRLTTPLIKKDGVFVEASWDEAIG
LVAAKLGQVKEQHGSESLAVLSSARCTNEENYLLQKFTRAVLGTNSIDHCARLUHAPTVA
GLANAFGSGAMTNSIDEIAGADFILAIGTNTTESHPIISLKAKKAKRCGATLVVADPRRT
EMAELANVHMQLKSGSDIALLNALANVIIAEELWNKDFVANRTEDFEALKDTVVKYTPEY
AEQITGIAADTIREVARGYARAQNATILYTMGITQHICGTHNVFAVANLAMLCGHIGKES
SGVNPLRGQNNVQGACDMGALPNVFTGYQAVTVDNNRAKFAKAWNVTELPAQPGLTVGDM
LDKAGTGEVKAMYIMGENPVLSDPDSDHVAHALGKLDFLVVQDIFLTETAALADVVLPAA
SYAEKDGTFSNTERRVQRVRKAIDPVYNARADWQIICAVATAMGYPMQYPTTSDIFDEIA
SLTPSYAGISYARLEQGGIQWPCPNAEHPGTKYLHKDKFSRGLGKFNPVEYIPPAEMPDT
DYPLVLSTGRRHFHYHTGTMTQRTGALEVHYGTEYLEINQADAAALGIVDGDKVRVTSRR
GQVEVAVRVTDVVPQGLVFTSFHFPAVAINKLTNPAKDPVAKIPELKVCAVKVEKAV
NT seq 2694 nt   +upstreamnt  +downstreamnt
ttgacggtggcggaagttacattaacaattaacggcatatccgtaaccgttcccaaaggg
accaccgtgctggaggccgcccgccaggcaggggtgtttatacccaccttttgccacgac
ccggagcttaccaagtttggtgcctgccggatgtgcgtggttgaaatacctggcatgcgt
aatttacctgcctcctgtgtcaccgaggccacggatggcatggtggtacacgctgattca
cctgcggtacaggaagccaggaaagtcatacttgaactaatgctggccaaccacccgatg
gactgcctcacctgcggcaaaaacggggactgccggctgcaggattacgcctatatgtac
ggcgtaaaaactgagccctttgaaggtgaaaagcacagctatccactggaggacgataac
cccttcatcgtaagggatatgaataaatgtatattgtgcggcaaatgtgtgcgtgcctgc
gccgaaattcagggcaagagcatcgtagactttgcctaccggggatttgacgccaaaatc
acccctgctatggacgtgcccctttcggcatctgaatgcgttttttgcggcaactgcgta
gcggtatgtccggtgggtgcactgcaggaaaaaggactgcgtgccgcggcccgaacctgg
gaagtgcaaaaggttaaaaccacctgcccgtactgtggtacaggctgcagttttgaactt
aacgtcaaggacaataaagtagtgggggtcacctcctgcgacggcgatgtcaatggccgg
gcactgtgcgtcaagggccgcttcggctatgggtttattcatcaccccgaccgcctgacc
acaccgctcattaaaaaggacggcgtatttgtggaagcctcctgggatgaggccattggc
ttggtggccgctaaactgggacaggtaaaggagcagcacggtagcgaatcgctggcggtg
ctcagctcggccaggtgtaccaatgaagagaactatctgctgcagaaattcacccgcgcg
gtactcggtaccaacagtatcgaccactgcgcccgtctctgacacgctcccaccgtcgcc
ggtctggcgaatgcatttgggagcggggcaatgaccaacagtattgatgaaatagccggg
gctgactttattctggccatcggcactaataccacggaatcgcaccccattatcagcctg
aaagccaaaaaggcgaaacgctgcggtgcaaccctggtggtggcggacccgcggcgcacc
gagatggcagagctggccaacgtgcacatgcagctaaagtcgggctccgatatagcactg
ctcaatgctctggccaatgtcattattgctgaggagttatggaataaagatttcgtggcc
aatcgaaccgaagacttcgaagcccttaaagatactgtggttaagtacaccccggaatat
gccgagcaaattacgggtattgctgcggacactatacgggaagtagcccggggctatgcc
cgggcgcaaaatgccaccatattatatacaatgggtatcacccagcacatttgtggcacc
cacaacgtatttgccgtggccaacctggccatgctgtgtggacatatcggcaaagaaagc
agcggcgtcaacccactgcgaggccaaaacaacgtgcagggggcctgcgacatgggcgcc
ttgcccaacgtattcacgggctatcaggctgtgacagtggataacaaccgggccaagttc
gctaaagcctggaatgtgacggaactacccgcccagcccggcttgaccgtgggagatatg
ctggacaaagccggaacgggtgaagtaaaagccatgtacatcatgggcgaaaaccctgtg
ctgtccgatcccgacagcgaccacgtagcccacgccctgggcaagctggactttttggtg
gtgcaggatatcttcctcactgaaacggcagccctggccgatgtggtactgcccgcagcc
agctatgccgaaaaagacggcaccttcagcaataccgagcgccgggtacagcgggtgcgc
aaggccatcgacccggtgtacaacgcccgggcggactggcagattatctgtgccgtggcc
acggctatgggctatcccatgcagtatcccactacctcggacatatttgatgaaatagct
tccctgaccccgtcctatgcaggcatatcctatgcccggttggagcagggcggcatccag
tggccctgtcccaacgccgagcacccgggtacaaaatacctgcacaaggacaagttttcc
cggggtctgggtaaatttaacccggtggaatatattccaccggcggaaatgcctgatacc
gactacccgctggtgctgagcaccgggcggcggcatttccactaccacacaggcaccatg
acccagcgtaccggcgcactggaagtgcactacggtactgaatacctggaaattaaccag
gcagacgccgccgccctgggcatagttgacggagataaagtacgggtaacctctcgccgc
ggccaggtggaagtagcggtacgcgtcacagatgtggtgccccaggggctggtatttaca
tctttccacttcccggcggtggctatcaacaagcttaccaacccggcaaaagaccctgtg
gccaagataccggaactgaaggtatgcgctgtgaaagtggaaaaggcggtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (36)   

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