KEGG   Desulfoscipio gibsoniae: Desgi_2562
Entry
Desgi_2562        CDS       T02657                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
dgi  Desulfoscipio gibsoniae
Pathway
dgi00300  Lysine biosynthesis
dgi00470  D-Amino acid metabolism
dgi01100  Metabolic pathways
dgi01110  Biosynthesis of secondary metabolites
dgi01120  Microbial metabolism in diverse environments
dgi01230  Biosynthesis of amino acids
Module
dgi_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:dgi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Desgi_2562
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Desgi_2562
Enzymes [BR:dgi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Desgi_2562
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AGL01968
UniProt: R4KFL5
Position
complement(2599955..2601301)
AA seq 448 aa
MKLQGTMQINDKGHLEIGGCDTVELAERFGTPLYVLDEQYFRQNCRNYYRAFTEKYDGIV
LYAAKTLLTLAVCRMVAEEGLSLDVVSGGELYTAKKARFPMERVYFHGNNKSAAELKLAL
EYKVGRIMVDNPHELQMLDRLAGEAGVRAKIMLRLTPGVEAHTHEYIKTGQIDSKFGMVI
ENGQAMEIIKQALALENVQLTGLHCHIGSQIFELQSYAHAAEVMLGFAAEVRRETGWQPE
EMNFGGGMGIYYTAADEPQPVSKYADMLVQAVKTLAQAHDLIVPRVLVEPGRSISGPAGT
TLYTVGAVKNIPGIRKYVAVDGGMGDNPRPALYQSRYEALLANRAAQQPQETVSIAGKCC
ESGDMLIWDIDLPTPAPGDILSVSATGAYNYSMSMNYNRLPRPAMVLVRDGAADIIVARE
TYDDLIRNDVVPERLGESRVVKIAGAGR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgaagttacagggcacaatgcaaattaacgataagggtcaccttgaaataggcggttgc
gataccgtggagctggccgagagatttggcacgcctttatatgtattggatgaacaatac
ttccggcaaaattgtcgcaactattaccgggcttttacggaaaaatacgacggtatagta
ttatatgccgctaaaacattgcttactctggcagtttgccgtatggtagccgaggaagga
ttaagcctggatgtggtatcgggcggcgagttatataccgccaaaaaggcacgttttccc
atggaacgggtatatttccacggtaataacaaatcggctgccgagctaaaattagctttg
gaatataaggttggccggattatggtggataacccgcatgaactgcaaatgcttgaccgg
ctggccggtgaggcgggtgttcgggccaaaattatgctgcgactgacccccggggtggaa
gcgcatactcatgaatatatcaaaaccgggcaaattgacagcaagtttggcatggtcatt
gaaaacgggcaggccatggaaataatcaagcaggcgctggcccttgagaatgtccagctt
accgggctgcactgccatatcggctcgcagatatttgagctgcaatcttacgctcacgca
gctgaggtaatgcttggttttgccgccgaagtgcgccgggaaacaggctggcagccggaa
gaaatgaactttggcggcggcatgggcatatactataccgccgcagatgaaccccagcca
gtgagtaaatacgccgacatgctggtacaggcggtaaaaactttggcccaagcacatgat
ctgatagtacccagggtgctggtggagcccggccgttccatcagtggcccggccggaacg
acactgtatacggtgggtgcggtgaaaaatatacctggcattcgcaaatatgtggcggtg
gatggcggtatgggcgacaatcccaggccggcattgtaccaatcccgctatgaagcgctg
ctggcaaaccgggcggcccaacagccccaggagacagtttccatagccggaaagtgttgt
gaatcgggcgatatgctgatttgggatattgatctccccactcccgcccccggcgatatt
ctgtcggtatccgccacgggagcttataactattccatgtcgatgaattataaccgcctc
ccccgcccggccatggtgttggttcgggatggcgcggcggatattatcgtggcccgggaa
acttatgatgatttaatcagaaatgatgtggtgccggagcggttaggtgagagccgggtg
gttaaaatcgctggtgccgggcggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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