KEGG   Dendronephthya gigantea (soft corals): 114519524
Entry
114519524         CDS       T06112                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
dgt  Dendronephthya gigantea (soft corals)
Pathway
dgt03030  DNA replication
dgt03410  Base excision repair
dgt03420  Nucleotide excision repair
dgt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dgt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114519524
   03410 Base excision repair
    114519524
   03420 Nucleotide excision repair
    114519524
   03430 Mismatch repair
    114519524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dgt03032]
    114519524
   03400 DNA repair and recombination proteins [BR:dgt03400]
    114519524
Enzymes [BR:dgt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     114519524
    6.5.1.6  DNA ligase (ATP or NAD+)
     114519524
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     114519524
DNA replication proteins [BR:dgt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    114519524
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     114519524
DNA repair and recombination proteins [BR:dgt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     114519524
   NER (nucleotide excision repair)
    Other NER factors
     114519524
   MMR (mismatch excision repair)
    Other MMR factors
     114519524
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 114519524
NCBI-ProteinID: XP_028395470
Position
Unknown
AA seq 919 aa
MPQRSIASFFSSKPKVKESNNEQKDCGKSRKSSEESSIKDETLPGADQFSPIKKTKKSSK
KILVDSDEEDQLNGKGDQANGDKECKNGSSTDEGLRSAEESKEVKRTEEPKSCSPNEIPK
RKTARKHMRKRKADEDSSSNSDDHKTVKKSKTSDNTETSIKSEPMDTDENKPETKNEESS
EVKSEKGQTDIKSEEDKTDMEDEVKSEVKEGNNNKVDTVDKDSSSPKPKKTFHSFFGKPS
SKSEATKTEDASSNGEIVDSREYNPEKNTYHPIKHACWKHKERVPYLALARTFQSIEDTS
ARLKITSTLCNLFRSVIALTPDDLLPTLYLCLNKLAPAYEGIELGIGDGVLIKVIAEATG
RSSQQVKSEFAEKGDLGIVAEASRSTQRTMFTPAKLTIVTVYNKLKDIAMMTGHSSVNRK
VDKVKSMFVACRQSEARYLTRSLAGKLRIGLAEQTVLTALAHAVVFTPPSKDFPPEVLDA
SKGLSAESFKKKLDEAALCIKTCYCELPNYNLLIPALLQHGWRELPEHCHLTPGVPLKPM
LAHPTKGVDEVFKRFEDASFTCEYKYDGERAQIHVLNNEDIRIYSRNQENNTTKYPDIIA
RMSKVLKENVQSCIIDSEAVAWDPEKKQILPFQVLSTRKKKDANASEIKVQVCIYAFDLL
YLNGKSYVKEPFKVRRELLRSSLNEIEGGFIFAKCITSTDTDDIAEFLDESIKGNCEGLM
VKTLEVDATYEIAKRSHNWLKLKKDYLEGVGDTLDLLVMGAYMGKGKRAGRYGGFLVACY
DEEKEEFQSCCKVSTGLKDEDLEAQYNLFQEHIIAKPKPYYRFDQSLEPDVWFDAIKIWE
VKCADLSISPVHKAAAGIVDSEKGISLRFPRFIRVREDKKPEQATSSVQVAEMYRNQDTV
KNNQAASSVNAGDDLDDFY
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgcctcaaagaagcatagcgtcgttcttttcatcaaaacctaaggtcaaagaaagcaat
aacgagcaaaaagactgtggaaaatcaagaaagtcctcagaagaatcgtcaataaaggat
gaaacattgcctggtgcagatcaattttcccctattaaaaagacaaagaaaagttcaaaa
aaaatactggttgacagcgatgaagaagaccagttgaatggaaaaggtgaccaggcgaat
ggtgataaggaatgtaaaaatggtagttcaacagatgaaggcttgagatcggctgaagaa
agtaaagaggttaaaaggacagaagaaccaaagtcatgtagtccaaatgaaattccaaaa
cgtaaaactgcaagaaaacacatgagaaagaggaaggcagatgaagatagttcatcaaac
agtgatgaccataagactgtaaagaaatcaaagacaagtgacaatacagaaacctcaatc
aaatctgaaccaatggacaccgatgaaaataaaccagaaacaaagaatgaagagagcagt
gaagtaaaaagtgaaaaaggtcaaactgatataaaaagtgaagaagacaaaactgatatg
gaagatgaagttaagagtgaagttaaggaagggaataataacaaagttgacactgtagat
aaagacagctcatctcctaaaccaaaaaagacgttccacagtttctttggaaaaccctct
tcaaagtctgaagcaacaaaaactgaagatgcctccagcaatggagaaattgttgactct
agagaatataaccctgaaaagaacacttaccatcctataaaacacgcctgttggaaacac
aaggaaagagtcccttatttagctctcgccagaacctttcaatcgattgaagacacatca
gccaggttgaaaattacatcgactttgtgcaatctttttcgctcggtgatagctctaacc
ccagatgatctgctaccaactttatacctctgcttaaataagcttgcgccagcctatgaa
ggtattgaacttggtattggtgatggtgttttgatcaaagttattgcagaagctactggt
cgcagttcccaacaagtcaaatctgaatttgcagaaaagggggatcttggaattgttgct
gaggccagtcgttcaacacagcggacaatgttcacccctgccaaacttaccattgttaca
gtttacaacaagttaaaagacattgctatgatgactggacattcatcagtcaatcgtaaa
gtggacaaagtgaaaagtatgtttgtggcgtgtcgtcaatccgaggcgagatacctaaca
agatccctcgcgggcaaactccgtatcggactagcagaacaaactgtcctcacagctttg
gcgcatgctgtcgtcttcacccccccgagcaaagattttcctcctgaagtattggacgcc
agtaaaggtttatctgccgagagttttaaaaagaaactcgatgaggctgctttgtgtatc
aagacgtgttactgcgagttgccaaattacaatcttcttattcctgctttgcttcaacat
ggttggcgagaattaccagagcattgtcatcttacaccaggtgttccattaaaaccgatg
ttggctcatccaacgaaaggtgtagatgaagttttcaaaagatttgaagatgcttcattc
acttgtgaatataaatacgacggagagagagctcagatccacgttttgaacaacgaggat
attcgcatttatagccgtaaccaggagaataacaccacgaaatatccggatattattgca
agaatgtcaaaggtcctaaaagagaacgtgcagtcgtgtattattgattcagaggccgtc
gcgtgggatccggaaaagaaacagattttgccatttcaagttttaagcacaagaaaaaag
aaagatgccaatgcttcagagataaaagttcaagtgtgtatttacgcgtttgacttgctt
tatttgaatggaaagtcttatgtcaaagagcctttcaaagtcagacgagaattattgagg
tcttcactgaacgagattgagggcgggttcatctttgcaaaatgcataacatccacagac
acagacgacattgctgaattcctggacgagtctatcaaaggaaactgtgaagggttgatg
gtaaaaacgctggaagttgatgccacatatgaaatagctaagcgatcacacaactggtta
aagttaaagaaagactatcttgaaggtgttggcgatacgctggatcttcttgtgatggga
gcatatatgggaaaaggaaagagagctggtcgttatggcggctttctggtcgcttgctac
gacgaggaaaaagaagaattccaatcctgctgcaaagtcagcactggtttaaaagatgaa
gatctagaagctcagtataacctatttcaagaacatattattgcgaaaccaaaaccttat
tatcgtttcgatcaaagtcttgaacctgatgtttggtttgatgcaatcaagatttgggag
gtaaaatgtgctgacctctcaatctctcccgtccacaaagccgcagctgggattgttgac
tctgagaaaggaatctcgttgcgtttcccaagattcatccgcgtacgagaagacaagaaa
ccagagcaagccacgtccagcgttcaggtggcggaaatgtacagaaatcaggacacagta
aagaacaatcaggccgcatcaagcgtcaacgctggcgatgaccttgacgatttctattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (7)   
   KEGG ENZYME (3)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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