KEGG   Dendronephthya gigantea (soft corals): 114533945
Entry
114533945         CDS       T06112                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
dgt  Dendronephthya gigantea (soft corals)
Pathway
dgt03018  RNA degradation
dgt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dgt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114533945
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114533945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dgt03019]
    114533945
   03041 Spliceosome [BR:dgt03041]
    114533945
Messenger RNA biogenesis [BR:dgt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     114533945
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     114533945
Spliceosome [BR:dgt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    114533945
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 114533945
NCBI-ProteinID: XP_028411378
Position
Unknown
AA seq 79 aa
MSRKQTPSDFLKQIIGRPVVVKLNSGADYRGVLACLDSYMNIALEQTEEYVNGQLKNKYG
DAFIRGNNVLYISTQKARR
NT seq 240 nt   +upstreamnt  +downstreamnt
atgagtcgaaagcaaactccaagtgactttttaaagcaaattatcggccgtcctgtggtc
gtgaaactgaatagtggtgcagattatagaggtgtcctggcttgtcttgatagttatatg
aacattgctttggaacagactgaggaatatgtgaatggacagttaaaaaacaaatatggt
gatgctttcattcgtggaaataatgtgttatacattagtacacagaaagcaagaagatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system