KEGG   Debaryomyces hansenii: DEHA2F04136g
Entry
DEHA2F04136g      CDS       T01026                                 
Name
(RefSeq) DEHA2F04136p
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
dha  Debaryomyces hansenii
Pathway
dha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DEHA2F04136g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dha03019]
    DEHA2F04136g
Enzymes [BR:dha01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     DEHA2F04136g
Messenger RNA biogenesis [BR:dha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     DEHA2F04136g
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     DEHA2F04136g
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1 LRR_6
Other DBs
NCBI-GeneID: 2903197
NCBI-ProteinID: XP_460546
UniProt: Q6BMM5
Position
F:complement(373608..376103)
AA seq 831 aa
MNIPKYQQAQVQGQQPNLQAQQILLQQLQQGQSQQSQPSIGGSGSAGQFSQQDIYNDNIA
QQGLYQNSYQRPVQAQQPPQLQNIHQQQQFFPQQFSSQQQNQPQASSLQQYQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQPQIHLPQQYQQSQGQQVPHQPPHIQQQQFFNQQAAALQQQ
QQQQQQQQQQQQQPAQKLNSINIENPNSIYWQHQQQLCQLSRNANIPHYYARQYAANSRK
NKNPYSDVKTVSLIDATRSIVSALNEQENSKSNPGSATNSALLQNKKLAQDLDDDHLQEE
QRMRQKTQGRQLWCQLDLSGQGLVNLSPKLFQYDFLESLYLNNNKLTSVPPIVNKLRSLR
TLDLSHNRINEVPSELGMCFNLRYLYLFDNNIKTLPNEFGNLIELLFLGIEGNPIDLKIA
NLVAEKGTKELIAYLRDLKPSFSKPPPRQWLLLEDDGEIIDPINNPDAYTNDNNNSDTND
TFTMMSYNTLCQHYATTKMYKYTPSWALEWGFRRAALQEEVLHFKSDLVCMQEVETRTFH
EFWVPVMQGFGYKGVFFNKTRSKTMSESDSKKVDGCATFYKTDKFELLHKQNFEYNSVCM
GSDKYKKTKDLFNRFMNKDNIALITYFNHIQTGEKILFVNTHLHWDPAFNDVKTLQVGIL
LEELRTIMKKYHHTNSIDEIKNASMVICGDFNSTKENAVYQLFSTGAVSNHEDLEGRDYG
KFTDEGFRHSFKLKSAYDHVGELPFTTISPAFTDAIDYIWYSTPTLQVKGLLGKIDEEYS
SHCIGFPNAHFPSDHIPLVTKFQIKKSGGNKKPDFKPDFKPDFKSGSSRKT
NT seq 2496 nt   +upstreamnt  +downstreamnt
atgaatattccaaaatatcaacaggcgcaagttcaaggacaacagcctaacttgcaagca
caacagatcttactacaacaattacaacaaggacagtcacagcagctgcaaccatccata
ggaggtagtggtagtgcgggacagttctcccagcaggatatctataatgataatatagcg
caacaaggtctttaccaaaatagctaccaaaggccagtgcaagctcaacagccaccgcaa
ttgcagaatatccatcaacagcaacagtttttcccccagcaattcctgctgcaacagcaa
aaccagccacaggcactgctgttgcagcaataccaacagcagcaacaacaacaacagcaa
caacaacaacagcaacaacaacagcaacaacaacagcaacaacaacagcaacaacaacag
ccccaaatacatctccctcagcagtatcaacaatcgcaaggacaacaggtgcctcaccaa
ccaccgcatatacaacagcaacaattttttaaccagcaagcggctgcattgcaacaacag
caacagcaacaacagcaacagcaacagcaacagcaacaaccggcacaaaaactcaactcc
attaacatagaaaatccaaattcgatatactggcaacatcaacaacaattgtgtcaattg
tccagaaatgcaaacattccgcattactatgcaagacaatatgctgcaaactccagaaag
aataaaaatccatacagcgacgtgaagacggtgagtttgatagacgccacgagatctata
gtttctgctttgaatgaacaagagaattctaaatccaaccctggatctgctactaactct
gcgttattacagaacaagaaattggcacaagatttggacgatgatcacttacaagaagaa
cagagaatgaggcaaaaaactcaaggaagacaattatggtgtcaattagacttgagtggt
caagggttggtcaatttatctccaaaattatttcagtatgattttttggaatcgctttat
ttgaataataataaattaactagcgttccgccaatagtcaacaaattaaggagtttgaga
accttagatttgtctcacaatagaattaatgaagtaccatcggaactaggaatgtgcttc
aacttaaggtacctttatttatttgacaacaatatcaaaaccttacctaatgaatttggt
aatctaattgagttattatttttaggtatcgaaggtaacccgatagatctaaagattgca
aatttagttgcggaaaaaggaaccaaagaattgattgcttatttaagagatttgaagcca
agtttcagtaaacctcctccaagacaatggttattgttagaagatgatggtgaaataatt
gatccaataaataacccagatgcttataccaatgacaacaacaactctgatactaatgat
actttcacgatgatgtcatataatactttgtgtcagcattatgccactactaagatgtat
aaatacactccgtcgtgggctttggaatggggctttagaagagctgcattgcaagaagaa
gtattgcattttaagagtgatttggtttgtatgcaagaagttgaaaccaggacattccat
gagttttgggtacctgtcatgcagggatttggttataagggtgtgttctttaataaaacc
agatctaagactatgagtgaatctgactcaaagaaggttgatggttgtgccactttctat
aagactgacaagtttgagttacttcacaagcaaaacttcgaatataacagtgtttgcatg
ggatctgataaatataagaaaactaaggatttatttaatagatttatgaacaaagataat
attgctttaatcacatactttaatcacattcagactggtgaaaagattttgtttgttaat
acgcatttgcattgggatcctgcttttaatgatgtcaagacattacaagtcggaatttta
ttggaagaattacgtactatcatgaagaaataccaccatacaaattctattgacgaaatt
aagaatgcatcaatggttatttgtggtgattttaactccaccaaggaaaacgctgtttat
caattattttctactggtgctgtatccaaccatgaggatttggagggtcgtgattatggt
aagtttacagatgaaggattccgtcacctgttcaaattgaaatcagcatatgatcacgta
ggtgagttaccattcactacaatttcgccagcatttaccgatgccattgactacatttgg
tattcaactcctactttgcaagttaaagggttattgggaaaaattgatgaagagtattca
agtcactgtattggtttccctaatgcacacttcccatctgatcacattcctttggttacc
aaattccaaatcaagaaaagtggtggcaacaaaaagcctgacttcaagcctgacttcaag
cctgacttcaaatctggatcttctagaaaaacttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (71)   

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