KEGG   Delftia sp. HK171: BO996_17515
Entry
BO996_17515       CDS       T04584                                 
Name
(GenBank) type VI secretion protein
  KO
K11891  type VI secretion system protein ImpL
Organism
dhk  Delftia sp. HK171
Pathway
dhk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dhk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BO996_17515
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dhk02044]
    BO996_17515
Secretion system [BR:dhk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BO996_17515
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF5329
Other DBs
NCBI-ProteinID: APE49512
Position
3962273..3965929
AA seq 1218 aa
MIRRIASWLFNRYMLELLGLVALSLLIWFVGPLVFIQPYQPLGSPTVRWWIIAGLFILWF
LRLLLRWWRAQRMNEHLMTGLARLTSPREADGTPAAGSEEVAELESRFKEALDTLSKTRF
GQTEGGLFGRWNKRYIYQLPWYLIIGSPGSGKTTALINSGLDFPLAAQFGKRAIPGIGGT
RNCDWWFTDQAVLLDTAGRYTTQESDAEQDKAAWKGFMQLLKRFRGRQPVNGVIVTLSVQ
ELLSASDAERAQLAQLIGLRLSELCEELTIRFPVYVLVTKSDLLAGFNEFFGAMSREERA
QVWGFTYPYDEKTQRSPASDPQAASALYMEEFDALVAQINRLLPQRLMTEPDLARRSLLY
ALPQQFAGLKDVVRDTLDAAFSASRFKEKPLLRGVYFTSGTQEGMPFDRVMSALSRRFAL
RGRLPADAVPQQGRSYFLESLFKDVMFNESGLTGRNAKKERQLRLMQAAGLCALLLALGG
AALAWTLSYENNQRYLNEVADNAGTLRQAVEESKATDPDNVVALVPMLNHAARVAQSSRF
EESAPLGWRWGLLQVPKVQTAAHATYLRLLEDAWLPRLSSHVARSLRQVSTGSPEASYET
LKAYLMLYEPDHFDATFVKAWLRSDWENTLPQHLVQAGLVDQLSEHLDRLIDGRVVVSAQ
PIDANLVAEVRQRLAQMSPAQRAYSRLKQLLNTGDKLPPDFSVVRASGPEAPQVFARASG
KPLTQGISGLFTYDGYHGLFLHELPKVTTLLAKEETWVLGQAEGRRSVAQEVLTGQLANE
VKRLYLMEYARLWETFLADIRPIRTASLEQAGEQARLYSSANSSLEQFIRAVARETTLAR
RPDQQEGGSSGSTSSWLGEKLQRIREEQHQLSRLTGKPLNVGGMLATGTLEADIVDFRFR
EYRRLATSNGSGPAPITASLQVLNEAAAVIASARQQVIQGGGVPPSLSGTLEKVRSEAKR
VPPPLNSMYEALATSTSSFVGSSVRSTLGGNLNATIGDFCRRAILGRYPFTRSATRDVTT
DDFARLFATGGTMDEFFRTQLQTMVDISTVPWTFKQGVDGTPVGGSASLAAFQRAASIRD
VFFRAGGNTPGIRLEIKPLDMDASISQMVLDVDGEIVRYQHGPQIPKAVSWPGTRGTGQA
RLQITAAGAQNTGIVTEGPWALHRLFDRAQILPGNSPERFTAIFTIDGRKLRMEVTTSSV
LNPFRLKAMEEFECPDRL
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgatccgtcgcatcgcctcatggctgttcaaccgctacatgctggagcttctgggcctg
gtggccctgagcctgctcatctggttcgtcggcccgctcgtcttcatccagccctaccag
ccgctgggcagccccaccgtgcgctggtggatcatcgccggcctgttcatcctctggttc
ctgcgcctgctgctgcgctggtggcgcgcacagcgcatgaacgagcacctcatgaccggc
ctggcccgcctgacctcgccgcgcgaggcggacggcacgcccgcagcaggctccgaggaa
gtggccgagctggagtcgcgcttcaaggaagccctggacacgctgagcaagacccgcttc
ggccagaccgaaggcggcctgttcggccgctggaacaagcgctacatctaccagctgccc
tggtacctgatcatcggctcgccgggttcgggcaagaccacggccctgatcaactcaggg
ctggacttcccgctggcggcccagttcggcaagcgtgccatccccggcataggcggcacg
cgcaactgcgactggtggttcaccgaccaggccgtgctgctggacacggccggccgctac
accacccaggaaagcgatgcggagcaggacaaggcagcctggaagggcttcatgcagctg
ctcaagcgctttcgcggacgccagcccgtcaacggcgtgatcgtcacgctcagcgtgcag
gaactgctcagtgccagcgacgccgagcgcgcccagctggcccagctgatcggcctgcgc
ctgagcgagctgtgcgaggagctgaccatccgcttccccgtctacgtgctggtcaccaag
agcgacctgctggcgggcttcaacgagttcttcggggccatgagccgcgaggagcgcgcc
caggtctggggcttcacctacccctatgacgaaaagacccagcgctcgcccgccagcgac
ccgcaggcagccagcgccctgtacatggaggagttcgacgccctagtcgcccagatcaac
cgcctgctgccccagcggctgatgaccgagccggatcttgcgcgccgcagcctgctctac
gcactgccccagcagtttgccggcctcaaggacgtggtgcgcgacacgctggatgcggcg
ttctccgcctcgcgcttcaaggaaaaaccgttgctgcgcggcgtctacttcaccagcggc
acgcaggagggcatgcccttcgaccgcgtgatgtccgccctgtcgcgccgctttgcgctg
cgtggccgcctgccggccgatgccgtgccacagcagggccgcagctacttcctggagtcg
ctgttcaaggacgtgatgttcaacgagtccggcctgaccgggcgcaacgccaagaaagag
cgccagctgcgcctgatgcaggccgccggcctgtgcgccctgctgctggccctgggcggc
gcggccctggcctggacgctgagctacgagaacaaccagcgctacctgaacgaagtggcc
gacaacgccggcacgctgcgccaggccgtggaggaatccaaggccaccgatcccgacaac
gtggtcgccctggtgcccatgctcaaccacgcggcgcgcgtggcgcagagcagccgcttc
gaggaatcggccccgctgggctggcgctggggcctgctgcaggtgcccaaggtgcagacg
gccgcccacgccacctacctgcgcctgctggaagacgcctggctgccgcgcctgagcagc
catgtcgcgcgctcgctgcgccaagtcagcaccggcagccccgaggccagctacgaaacg
ctcaaggcctatctcatgctctacgagcccgaccacttcgacgccaccttcgtcaaggcc
tggctgcgcagcgattgggaaaacaccctgccccagcatctggtgcaggccggcctggtg
gaccagctgtccgagcacctggaccgcctcatcgacggccgcgtggtggtctccgcacag
cccatcgacgccaacctggtcgccgaagtgcgccagcgcctggcccagatgtcgcccgcc
cagcgcgcctacagccgcctcaagcagttgctgaacaccggcgacaagctgccgcccgac
ttcagcgtggtgcgtgccagcgggcccgaggcgccccaggtctttgcgcgtgccagcggc
aagccgctcacccagggcatcagcggcctgttcacctatgacggctaccacggcctcttc
ctgcacgagctgcccaaggtcaccaccttgctggccaaggaggaaacctgggtgctgggc
caggccgaaggccggcgcagcgtggcccaggaagtgctcacgggccagctggccaacgag
gtcaagcgcctgtacctgatggagtacgcgcgcctgtgggaaaccttcctggccgacatc
cgccccatacgcacggcctcgctggagcaggccggcgagcaggcccgcctgtactcgtcc
gccaactccagcctggagcagttcatccgcgccgtggcccgcgagaccacgctggcccgc
cgcccggaccagcaggaaggcggcagctcgggcagcaccagcagctggctgggcgagaaa
ctgcagcgcatccgcgaggaacagcaccagctcagccgcctgaccggcaagccgctgaac
gtgggcggcatgctggccaccggcacgctggaggccgacatcgtggacttccgcttccgc
gaataccggcgccttgccaccagcaacggctcgggcccggctcccatcaccgccagcctg
caggtgctcaacgaggcggcggccgtcatcgcctcggcgcgccagcaggtgatccagggc
ggcggcgtgcctccctcgctaagcggcacgctggagaaggtgcgctcggaagccaagcgc
gtgccgcctccgctcaacagcatgtacgaggccctggccacgtccacctcgtccttcgtg
ggaagcagcgtgcgcagcacgctgggcggcaacctcaacgccaccatcggcgacttctgc
cgccgggccatcctgggccgctaccccttcacgcgcagcgccacgcgcgacgtgaccacg
gacgacttcgcccgcctgttcgccaccggcggcaccatggacgagttcttccgcacccag
ctgcagaccatggtggacatctccaccgtgccctggaccttcaagcagggtgtggacggc
acgccggtggggggctctgcctcgctggccgccttccagcgcgcggcctccatccgcgac
gtgttcttccgcgcaggcggcaacacgcccggcatccggctggagatcaagccgctggac
atggacgcctccatctcccagatggtgctggacgtggacggcgaaatcgtgcgctaccag
cacggcccgcaaatccccaaggccgtctcctggcccggcacgcgcggcaccggccaggcc
cggctgcagatcacggccgccggcgcccagaacaccggcatcgtgaccgaaggcccctgg
gcgctgcaccgcctgttcgaccgtgcccagatcctgccgggcaactcgcccgagcgtttc
acagccatcttcaccatcgacggacgcaagctgcgcatggaagtcaccaccagcagcgtc
ctcaacccattccggctcaaggccatggaggaattcgaatgtccggaccggctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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