KEGG   Maridesulfovibrio hydrothermalis: DESAM_21885
Entry
DESAM_21885       CDS       T02428                                 
Symbol
clpV
Name
(GenBank) Protein ClpV1
  KO
K11907  type VI secretion system protein VasG
Organism
dhy  Maridesulfovibrio hydrothermalis
Pathway
dhy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dhy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DESAM_21885 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dhy02044]
    DESAM_21885 (clpV)
Secretion system [BR:dhy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DESAM_21885 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 nSTAND3 Sigma54_activat AAA_7 Zeta_toxin DHHA1 AAA_24 AAA_30 AAA_25 NACHT SRP54 DUF4407 ABC_tran_CTD nSTAND1
Other DBs
NCBI-ProteinID: CCO24158
UniProt: L0RBI7
Position
2274332..2276962
AA seq 876 aa
MISVDIKNLLSKLNTYSTNALHNAAGLCVSLTHYEVSVEHYFLKCLEDVNSDLPIIMHQY
GVETSRLTASLSDVLEDFKSGNSGKPVFSPMLIELFEDAWLISSVELGDTRIRSGAVLLA
FLSKPNFYASGAYSSLLSEVSRDSLIKEFWSITKSSVEYKLPAAERGGSGPAGAAKGDGG
FLERFCVDFTAKAKEGGIDPVFGRDAEMRQMVDILARRRKNNPILVGEPGVGKTAVIEGL
ALRITEGDVPEILSGVSLIGLDMGLLEAGAGMKGEFENRLKGVIDEIKSSEKPIILFIDE
AHTLVGAGGSTGGSDAANLLKPALARGELKTCAATTWTEYKKYFEKDPALARRFQLVKLD
EPSVETSTIILRGLRDSYEKSHKVIIRDDACVSAAVFSDRYIAGRFLPDKAIDLLDTTCA
RVKVNLSAKPAQLEDCERTVQALEREKKAVDRDRLNGVAVDESRYREVDEMIASKTKEAD
QIRERWLKEKDAAHAVLDARQQVQAAGDDKAEVKKLKKELAKADKALARLQVDEALVQIE
VSPDLVGRVVSDWTGIPVGKMARDEAKTVVDLDIRLQQRVKGQDQGLAAIAEVIRASKAG
IKNPDQPIGVFLIVGPSGVGKTETGLSLADLLFGDERSVVTVNMSEFQEKHTVSRLIGSP
PGYVGYGEGGMLTEAVRRQPYSVVLLDEVEKAHLDVMNTFYQVFDKGILTDGEGKDINFK
NTIIILTSNLATDVIQEMTGGEDEMPLEAVTSAVRPILSQHFKPALLARMNVVPYVSLNP
EAMKLITRLKLGKLEKMLFNNNKMKLSYDEAVVDQIAARCTEVETGARNIEYILNGNVLP
QMSKEILGHMTEGGMPSAVHLSVAEDGSFSMEFSRD
NT seq 2631 nt   +upstreamnt  +downstreamnt
atgataagtgtcgatataaaaaatctgctttccaaactcaatacttacagcaccaatgct
ttgcataatgccgcggggctttgtgtatcgcttactcattacgaagtgtcggtggagcac
tattttctgaaatgtctggaggatgttaatagcgatctgcctattatcatgcatcagtac
ggcgttgaaacctcccgtctcacagcgtcactttctgatgtgctggaagattttaagtcc
ggtaattccggtaaacctgttttttcgcccatgcttatcgaactttttgaagatgcatgg
cttatctcttccgttgaactgggggatacccgcatccgctccggagcagtgctgctggcc
tttttatctaagcctaatttctatgcttccggggcatattctagtctgctttctgaagtc
agtcgcgattctttgattaaagaattctggagtattactaaatcatctgtggaatacaaa
cttcccgctgccgagcgtggcggaagcgggccggcaggagcagcaaaaggtgatggagga
ttccttgaacgcttttgtgttgatttcactgccaaggcgaaagaaggcgggattgaccct
gttttcggccgtgatgctgaaatgcgtcagatggtggatattctggctcgccgccgtaag
aataatccgatccttgtaggtgaacccggtgtaggcaagacagctgtaattgagggactg
gctctgcgtatcactgaaggagatgttcctgaaattctcagcggcgtatcgcttatcggc
ttggacatgggcctgcttgaagcaggggccggtatgaaaggtgagtttgagaaccgtctt
aaaggcgtaattgatgagatcaagtccagtgaaaagccgatcattttgtttatcgatgaa
gctcacaccttagtgggggcgggcggttcaacagggggatctgatgcggctaatctgctc
aagccagcccttgcacgcggggagcttaaaacctgcgcggcaacgacatggactgaatat
aaaaagtattttgagaaagatcctgccttggcccgccgttttcagctggtaaagcttgat
gaaccgtcagttgagacttcgaccattatattacgcggtctgcgtgacagctatgaaaaa
tcgcataaggttattattcgtgatgatgcttgtgtttcagccgctgttttttctgatcgt
tatatcgcaggacgttttctgcctgataaggcgattgatttgctggatacaacttgcgcc
cgtgtcaaagttaacctttctgccaagccggcgcagcttgaagattgcgaacgtactgtg
caggcccttgagcgcgagaaaaaggctgtggaccgtgaccggttaaacggcgttgcggtt
gatgaatcccgctacagggaagtggatgaaatgattgcttccaaaactaaagaagcggat
cagatccgtgaacgctggcttaaggagaaagacgcggctcacgctgtgcttgatgcacgg
cagcaggttcaggccgccggggatgataaggcagaagttaagaaactcaaaaaagagctg
gctaaagctgacaaagcccttgcaagactgcaagttgatgaagctctggtgcagattgag
gtttcccctgatctggtggggcgggttgtttcggactggactggaattccggtgggtaaa
atggctcgtgatgaggctaaaacagtggtcgaccttgatatccgccttcagcagcgagtc
aagggtcaggatcaggggcttgctgccattgccgaagttattcgcgcttcaaaggccgga
attaagaatcctgatcagcctatcggcgtatttttgatagtcgggccgtcaggtgtcggt
aaaactgaaactggcttatcgcttgcggatctgcttttcggtgatgaacggtcggtggtg
actgtcaacatgagtgaatttcaggaaaagcatacggtctcccggcttataggttctcct
ccgggctatgtcggctatggagaaggcggcatgcttaccgaagctgtgcgtcgtcagccc
tacagcgttgtgctgcttgacgaagtggaaaaggcccatctggatgttatgaacactttt
tatcaggtttttgacaaaggtattctcaccgatggtgaaggcaaggatatcaatttcaaa
aacaccataattatcctgacttccaatctggcgaccgatgtcattcaggaaatgaccgga
ggcgaagatgaaatgccccttgaggctgtaacttcggcagtcaggcctatactttcccag
catttcaagccggctcttctggctcgtatgaatgtggttccgtatgtctcgcttaatccg
gaagccatgaaactgatcacccggctcaagctcggcaaacttgagaagatgttgtttaat
aataacaagatgaaacttagctatgacgaagctgttgttgatcagatcgcggcccgttgc
accgaagttgaaaccggtgctcgaaatattgaatatatcctgaacggtaatgttctgccg
cagatgtccaaagagattcttggacatatgaccgaaggcggcatgccttcagccgtgcat
ctcagtgtggctgaagacggttcattctccatggaattttccagagattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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