KEGG   Dickeya poaceiphila: Dpoa569_000180
Entry
Dpoa569_000180    CDS       T06188                                 
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
dic  Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:dic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dic03016]
    Dpoa569_000180 (trmA)
Enzymes [BR:dic01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     Dpoa569_000180 (trmA)
Transfer RNA biogenesis [BR:dic03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    Dpoa569_000180 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_4 MTS Cons_hypoth95 Methyltransf_11 Methyltransf_31 Methyltransf_15 PrmA Methyltransf_12 Met_10 DREV
Other DBs
NCBI-ProteinID: QDX31879
UniProt: A0A5B8HTL6
Position
complement(207709..208812)
AA seq 367 aa
MTPEILPIDQYDAQLEEKTGRLGAMMAPFDAPAPAVFRSPVSHYRMRAEFRIWHDGDDLY
HIIFDQQTKQRIRVDQFPAASELINRLMPELLNVLRAEPVLRRKLFQIDYLSTLSGEIAV
SLLYHKALDDEWQQRARLLCDQLRGQGFALQLIGRATKTKICLDRDYVDECLPVAGRQMI
YRQVENSFTQPNAMMNIQMLEWALSVTQGATGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNIAANQIDNVQIIRMAAEEFTQTMNGVRQFNRLQGIDLAGYRCETIFVDP
PRSGLDDGTVKLVQAYPRILYISCNPQTLCANLETLNQTHRISQLALFDQFPYTHHMECG
VLLEKRQ
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgacgccagagattctgcccatcgaccagtatgacgcccagcttgaagaaaaaaccggg
cgcctcggtgccatgatggctcccttcgatgcgccagcaccagccgtattccgctcgccg
gttagccactaccggatgcgtgcagagtttaggatctggcatgacggcgatgacctgtac
cacattattttcgatcagcagaccaaacagcggatccgggtcgatcagtttccggcggcc
agcgagctaattaaccgcctgatgccggagctgcttaatgtattgcgagccgaaccggtg
ctgcggcgcaagttgtttcagattgattatctctccacgctgagtggtgaaattgccgtt
tccttgctttaccacaaagcgctggacgacgagtggcagcagcgtgcccgcctgttgtgt
gatcaactacgcggtcagggttttgctctacagttgattggccgggcgactaaaaccaaa
atttgtctggaccgggattacgtggatgaatgtctgccggtcgctggtcgccagatgatt
tatcgtcaggtggaaaacagtttcacccagcctaatgcgatgatgaatattcagatgctg
gagtgggcgctgtcagtaacacaaggcgcgacaggcgatttgctggaactgtactgcggc
aacggcaatttttcactggcgctggcgcgcaatttcgagcgggtactggcaaccgaaatc
gccaagccgtcagtcgcagcagcgcaatacaatatcgccgccaaccagattgataacgtg
cagattattcgcatggcggcggaagagtttactcagactatgaacggggtgcgccagttc
aaccggctgcaaggcatcgatctggctggctatcgctgtgaaactatcttcgtcgatccg
ccacgcagcggactggatgacggcacagtaaaactggtgcaggcgtatccgcgtattttg
tacatctcctgcaatccgcaaacactgtgcgccaacctggaaaccttgaatcaaacacac
cgaatcagtcagttagcactgtttgatcagtttccttatacccaccacatggaatgtggc
gtgctactggaaaaacgccagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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