KEGG   Dickeya poaceiphila: Dpoa569_001700
Entry
Dpoa569_001700    CDS       T06188                                 
Symbol
rsmF
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
dic  Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:dic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dic03009]
    Dpoa569_001700 (rsmF)
Enzymes [BR:dic01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     Dpoa569_001700 (rsmF)
Ribosome biogenesis [BR:dic03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Dpoa569_001700 (rsmF)
SSDB
Motif
Pfam: Methyltr_RsmB-F YebU_pre-PUA_dom Methyltr_RsmF_N Methyltranf_PUA Methyltransf_31 Methyltransf_25 Methyltransf_23 PCMT Ubie_methyltran
Other DBs
NCBI-ProteinID: QDX29896
UniProt: A0A5B8HLA4
Position
complement(1862970..1864418)
AA seq 482 aa
MAKPIPASLTPDFLTAMQAIMPAHLSMDAFIDACQRPLRRSIRVNTLKISVPDFLALVAP
YGWELEAVPWCDEGFWLLNADEEAMRLGNTLEHLAGLFYIQEASSMLPVSALFMGNDTPE
QVLDMAAAPGSKTTQIAARLNNQGVIVANEYSASRVKVLHANLHRCGVSNTALTHFDGRV
FGSALPETFDAILLDAPCSGEGVVRKDPAAMSHWSLESIADIAATQRELILSAFHALKPG
GVLIYSTCTLNHQENQHVCRWLMQQFPDACESESLKDLFPQAHRALTDEGFLHVFPQIYD
SEGFFVARLRKTASVPPLAAPDYKLGKLPFTPLSHKDAQLIRQHARQVGLQWSEQQLQLW
QRDDEIWLFPTAVQPMLGRIRFSRIGIKLAERFAKGYRWQHEAIVALGNPDSANACALSA
EQAVDWYRGKDIYPPSFINHDEMLLTWQQTTLGLTKRVGQRLKNTLPRDLVRDGANVVLS
ID
NT seq 1449 nt   +upstreamnt  +downstreamnt
gtggccaaacctattcccgcctccctcactcccgattttctgaccgccatgcaagccatc
atgcctgcgcatctgagcatggatgcctttatcgatgcctgccagcgaccactgcgccgc
agtattcgtgttaacacgttaaaaatcagcgtgcccgattttcttgcgctggtcgcgccc
tacggttgggaactggaagccgtaccctggtgcgatgaaggattctggttactgaacgct
gatgaagaagccatgcggctcggcaacacgctggagcatctggccggcctgttctacatt
caggaagccagctctatgctgccggtcagcgcactgttcatgggaaatgataccccggaa
caggtgctggacatggccgccgctcccggctccaaaaccacgcagatcgccgcccgactc
aacaatcagggcgttatcgtcgccaatgaatactctgccagccgggttaaggtgttgcac
gccaacctgcaccgctgcggagtcagcaatacagcgctgacgcactttgatggccgggta
ttcggcagtgctttgccagaaacgtttgacgccatcctgctggatgcgccctgctctggt
gaaggtgtggtcaggaaagatcctgccgccatgagccactggtcgctggaaagcatcgcc
gatatcgcggcgacccagcgcgagctgatcctaagcgccttccatgctctgaaaccaggc
ggcgtactgatttactccacctgcacgctgaatcatcaggaaaaccaacatgtttgccgc
tggctgatgcaacagttccccgatgcctgcgagagcgaatcgttaaaggatctcttcccg
caagcgcatcgtgcgctcaccgatgaggggttcttacacgtcttcccgcaaatttacgac
agcgaaggtttttttgtggcgcgtttacgtaaaaccgccagcgtaccgccgctggcagcg
ccggattacaaacttggtaagttgccgtttacccctctcagccacaaggatgcacagctg
attcgccaacatgcccgacaggtaggtctgcaatggtcagaacagcaattgcaactgtgg
cagcgggacgatgaaatctggttgtttccgacagcagtacaaccaatgctgggcagaata
cggttctcccgcatcggcatcaaactggcagagcgctttgccaaaggctatcgctggcaa
catgaagctatcgtggcgttgggcaaccctgacagcgcgaatgcctgtgcgctcagcgca
gagcaggctgtggactggtatcgaggcaaagacatttaccccccctccttcatcaaccat
gatgagatgctgttgacctggcaacagaccacgttggggctgaccaaacgcgtcggtcag
cggctgaaaaataccctgcctcgtgatctggtgcgcgatggcgccaatgtggtgctttcc
atcgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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