KEGG   Dickeya poaceiphila: Dpoa569_002590
Entry
Dpoa569_002590    CDS       T06188                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
dic  Dickeya poaceiphila
Pathway
dic03030  DNA replication
dic03430  Mismatch repair
dic03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dpoa569_002590 (holA)
   03430 Mismatch repair
    Dpoa569_002590 (holA)
   03440 Homologous recombination
    Dpoa569_002590 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dic03032]
    Dpoa569_002590 (holA)
   03400 DNA repair and recombination proteins [BR:dic03400]
    Dpoa569_002590 (holA)
Enzymes [BR:dic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Dpoa569_002590 (holA)
DNA replication proteins [BR:dic03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Dpoa569_002590 (holA)
DNA repair and recombination proteins [BR:dic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Dpoa569_002590 (holA)
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: QDX30685
UniProt: A0A5B8HN07
Position
2870195..2871226
AA seq 343 aa
MIRLYPEQLTAQLHEGLRGCYLLFGNEPLLLQESQDQIRTIARQQDFLEHFSFTLDNSTD
WDAIFSTCQALSLFASRQTLLLILPDTGPGAPASEQLVKLSTLLHSDILLIVRGSKLSKA
QENSAWFKALSQQGVYVPCMTPEQEQLPRWVAQRAKHMKLELDDAASQLICYCYEGNMLA
LVQALERLSLLYPDSKLTLPRVEQAVNDAAHFTPFHWLDALLGGKSKRAWHILQQLRLED
CEPVILLRTVQRELLLLLQLKRHMATTPLRTLLDQHKIWQNRRPLLTQALQRLSLTQLQQ
AITLLSRLEITLKQNYGQPVWAELETLSMILCGKALPDSLLEV
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgattcgtctctatcccgaacaactcaccgcgcagctccatgaggggctgcgcggttgc
tatctgttgtttggcaatgaaccgttattgctgcaagaaagccaggatcagatccgtact
atcgcccgtcagcaggattttctggagcatttcagtttcacgctggataacagcaccgac
tgggatgccattttttctacctgtcaggcactcagtttgttcgcctcccgccagaccctg
ttattgatactgccagacaccggtcccggcgcccctgccagcgagcaactggtcaagctc
tccacattgctacattccgatattctgttgatagtaagaggcagtaagctctctaaagca
caggaaaacagcgcctggtttaaagcgttgtcacagcagggcgtgtacgttccttgtatg
acgcccgaacaggaacagcttccccgttgggtagcgcaacgcgctaaacacatgaaactg
gaactggatgacgccgccagccagctaatttgctactgttatgaaggaaatatgctggcg
ttagtacaggcgctggagcgattatcgctgctgtatccggacagcaaactgacgttgccg
cgagtcgaacaagcagtgaatgatgctgctcactttacgccattccactggctggatgcg
cttctcggcggcaaaagcaagcgagcatggcacattttgcagcaattacgtctggaagat
tgcgaaccggttatcctgctgcgcaccgtacagcgggaattattgctgttgctacagcta
aaacggcacatggcaaccacaccgttgcgcaccctgcttgaccagcacaagatatggcaa
aaccgtcggccactattgacgcaggcgttgcaacgcctgtcgttgacgcaattacagcaa
gcgattaccctgctgagccgactggagatcactctgaagcaaaattatgggcaaccggtc
tgggccgaactggaaacgctgtcgatgatattgtgcggtaaagcgctgcctgacagcctg
cttgaggtatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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