KEGG T06191: COP05

Dermabacter jinjuensis: COP05_03240

Entry

COP05_03240       CDS       T06191

Name

(GenBank) phenylalanine--tRNA ligase subunit beta

K01890

phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]

Organism

djj Dermabacter jinjuensis

Pathway

djj00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:djj00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    COP05_03240
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:djj01007]
    COP05_03240
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:djj03016]
    COP05_03240
Enzymes [BR:djj01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     COP05_03240
Amino acid related enzymes [BR:djj01007]
Aminoacyl-tRNA synthetase
  Class II (U)
   COP05_03240
Transfer RNA biogenesis [BR:djj03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    COP05_03240
Prokaryotic type
    COP05_03240

SSDB

Motif

Pfam:

B3_4 tRNA_synthFbeta FDX-ACB B5 tRNA_bind

Other DBs

NCBI-ProteinID:

ATH96219

Position

712495..715089

AA seq 864 aa
MPRIPLSWLGEHVELADGATAEAVAASLVSVGLEEEGIFGAQVTGPLVVGRVLNLVKETH
KNGKTVNWCRVDVGDAHNEALDNPKDPQPGEEVPSRGIICGAHNFVEGDLVVVSLPGTVL
PGNFEIAARKTYGHISDGMICSTSELGLGEDSEDGIIVLGRGIADGIEAKPGDDAIALFG
LDEEVVEINVTPDRGYCFSMRGVAREYSHATGARFTDPALEIEVPEASGEGIQVLLEDDA
PIRGNVGATSYVAQRVNGVDTSAPSPRWMQQRLSLAGMRPISLIVDVGNYVMLDLGQPLH
MFDAAKLTEPIVVRRAKPGEVLTTLDDKARTLHPEDLVVADSTGGHGARPVALAGVMGGS
ETEVDASTADVVIEAAHFDPTTQARTARRHKLVSEAGKRGERGVDPALVEVAARRAAQLL
VEYGGGTLDSNRTHARAGKEVATEISLPLDYAERVVGVAYTREQVVGSLEKIGCAVSSAA
GGDNGEETVTVVPPTWRGDLRIPEDLVEEIARLEGYDAIASRLPSAPGGRGLTRAQRARR
AVANALAEAGATEVVSFPFTNDKTFAKLRLPEDSPLRNAVRLLNPLADDEPLMRTAILET
LLPVAQRNLARGEDSVAVFESGLVFEKRGERVPVPSASSRPSDAELEEIASSLAKQDRHV
ALVAGGPITAAGPLTEPRVWDWADAIAFARRVAAAAGTELVVEQGTASAFHPGRTAILST
VEGERVGVAGELHPAVIKAFSLPKNAAAFELDLEAVIESAPAVVPAEPISTFPIAKEDFA
FVVNDDTPAEAVRAALIVGIGDVAEEVRLFDEYRGDQVPEGKKSLAFAVRLRPHEKTLKG
AEIDEIRARAIAAVESAVGGELRA

NT seq 2595 nt +upstreamnt +downstreamnt
atgccccgcattcccctttcatggctcggcgaacacgttgagcttgccgatggcgctacc
gccgaggctgtcgcagcctcgctcgtctccgtcggcctcgaggaagaaggtatctttggc
gctcaggtcacggggcccctcgtcgtgggccgcgtcttgaacctcgtcaaggaaacccac
aaaaacggcaagaccgtcaattggtgccgcgtcgacgttggcgatgcgcacaatgaagca
ctcgacaacccgaaagatccgcagcccggcgaagaagtgccgagccgcggcatcatttgc
ggtgcgcacaactttgtcgagggtgacctcgtcgtggtgtcgcttcccggaaccgttctt
cccgggaacttcgagattgcggcacgcaagacctatggtcacatttccgacggcatgatc
tgctcgaccagcgagctgggcctcggcgaggatagcgaggacggcatcatcgttctcggc
cgcgggatcgccgacggtatcgaagcgaagccgggcgatgacgcgatcgccctttttggc
ctcgatgaggaagtcgttgagatcaacgtgacgcccgatcgcggctactgtttctcgatg
cgaggtgttgcacgcgagtactcccacgcgaccggggcgcgtttcaccgaccccgccctt
gagattgaggtgcccgaggcgagcggcgaggggattcaggtcctcctcgaagatgacgcc
ccgatccgcggcaacgtcggcgcgacctcctatgtcgcccagcgcgtgaacggcgtggac
acctcggcgcctagccctcgctggatgcagcagcgcctttcgctcgctggcatgcgcccg
atctcgctcatcgtcgacgtcggcaactacgtcatgctcgatctcggccagccgcttcac
atgttcgatgccgcgaagcttacggaaccgatcgtggtgcgccgcgctaagccaggcgag
gtgctcacgactctcgacgacaaggcccgcacgcttcaccccgaggacctcgtggtggcg
gactcgaccgggggtcatggcgcacgtcccgtcgcgctcgcgggcgtcatgggcggaagc
gaaaccgaagtcgatgcgtcgaccgccgacgtcgtgattgaggctgcgcacttcgacccg
acgactcaggcgcgcaccgcgcgccgccacaagctcgtgtccgaggccggcaagcgtggc
gagcgcggggtcgatcctgcgctggtggaggttgcagctcggcgtgccgcccagctcctc
gtcgagtacggcggtggaacgcttgactcgaaccgaacgcacgcgcgcgccggaaaggag
gtcgcgaccgaaatttcgctgcctcttgactacgcggagcgtgtcgtgggcgttgcatac
acgcgtgagcaggtcgtcgggtcgctcgagaagatcggctgcgccgtatcctccgccgcc
ggcggagacaacggggaggaaactgtcacggttgttccgcccacgtggcgcggcgatctt
cgcatccccgaggacctcgtcgaggaaattgcgcgactcgagggttatgacgcgattgcg
tcgaggctgccgtcggcccccggcggacgcggcctcactcgcgctcagcgggcgagacga
gccgtcgcaaatgccctcgctgaggcgggcgcgaccgaagtcgtgagcttcccgttcacg
aacgacaagactttcgcgaagcttcgtttgccggaggattctccgctgcgcaatgcggtg
cgactgctcaatccgctcgctgacgatgaaccgctcatgcgaacggcgattctcgaaact
cttctccccgtggcccagcgcaatctcgcgcgcggcgaggattcggttgcggtcttcgag
tccggtctcgttttcgaaaagcgaggcgaacgcgttcctgtgccgagtgcttcctcgcgc
cccagcgatgccgagttggaggagatcgcttcctcgctcgcgaagcaagatcgccacgtt
gcgctcgtggcgggcggtcccatcactgctgcggggccgttgaccgagcctcgtgtgtgg
gactgggccgatgcgattgccttcgcgcgtcgcgtcgctgccgctgccggcaccgaactc
gtggtggaacagggaacagcgagtgctttccacccgggtcgcacggcgatcctgtcgacc
gttgagggggagcgtgtgggcgttgccggcgagcttcacccggcggtcatcaaggcgttc
agtcttccgaagaatgcggctgcgttcgagcttgatctcgaagccgtgattgagtccgca
cccgccgtggtgccggcggagccgatctcgacgttcccgatcgccaaggaagattttgcg
ttcgtcgtgaatgacgacacgcccgccgaggccgtgcgtgcggccctcatcgtggggatt
ggcgatgttgcggaagaggttcgcctctttgacgaataccggggtgaccaggtccctgag
ggcaagaagtcgctcgcattcgccgtacgacttaggcctcatgagaaaacgctcaagggc
gccgagatcgacgagatccgtgcccgagccatcgccgcggttgaatcggccgttggtggt
gagctgcgcgcctaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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