KEGG T06191: COP05

Dermabacter jinjuensis: COP05_06125

Entry

COP05_06125       CDS       T06191

Name

(GenBank) histidine--tRNA ligase

K01892

histidyl-tRNA synthetase [EC:6.1.1.21]

Organism

djj Dermabacter jinjuensis

Pathway

djj00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:djj00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    COP05_06125
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:djj01007]
    COP05_06125
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:djj03016]
    COP05_06125
Enzymes [BR:djj01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.21  histidine---tRNA ligase
     COP05_06125
Amino acid related enzymes [BR:djj01007]
Aminoacyl-tRNA synthetase
  Class II (A)
   COP05_06125
Transfer RNA biogenesis [BR:djj03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    COP05_06125
Prokaryotic type
    COP05_06125

SSDB

Motif

Pfam:

tRNA-synt_His HGTP_anticodon tRNA-synt_2b

Other DBs

NCBI-ProteinID:

ATH96712

Position

complement(1340919..1342265)

AA seq 448 aa
MAKVTPLSGFPEWLPAERRIEQHVMDTFRDVAELHGFSNIETRAVEPLDQLLRKGETSKE
VYLISRLQADDEDRDKEGQKLGLHFDLTVPLARYVLEHQNDLAFPFRRYQIQKVWRGERP
QDGRFREFYQADIDIIGQDTLPPHMDADVAIVMAEVLGKLPIPGFTISVNNRKLSQGVFE
ALGLTDIEGVLRQLDKLAKVGEAEVRTLLIEHAGASEEQADGCLAFARIKATHEDLAEKV
NALGVSSEAIPHALEELSFVIRTVNASVPGACIADLSIARGLDYYTGTVFETFVEGHEDL
GSICSGGRYDTLATDNRHSYPGVGLSIGLSRLVSRLVTRSLATSTRAVPTVALVAVADEE
HREASVDVARVLRSRGISAEVAPSAAKFGKQIKYADRRGIPFVFFPSEDGRGEVKDIRSG
EQTPADAHTWQPPQDDMTARVVATTSTK

NT seq 1347 nt +upstreamnt +downstreamnt
atggcgaaagtgacgccgctttccggatttccagaatggctccctgccgagcgacgcatc
gagcagcacgtgatggacacgttccgggatgtcgcggagctgcacggcttctccaatatc
gagacccgtgcggttgagccactcgatcaactgttgcgcaaaggggagaccagtaaagag
gtctacctgatctcgcgccttcaagccgacgatgaggatcgcgataaggagggccagaag
ctcggccttcacttcgacctcaccgtcccgcttgcgcggtacgttctcgagcatcaaaac
gatctcgcgttccccttccgccgctaccagattcaaaaagtatggcgcggcgaacgcccc
caggacggccgtttccgcgaattttatcaagcggatatagacatcattgggcaagatacg
ctgcctcctcacatggatgccgatgtcgcgatcgtgatggccgaggtgctcgggaaactc
ccgattcctggcttcacgatctcggtgaacaatcgcaagctttcgcagggcgtcttcgag
gcactggggctcaccgacatcgaaggtgtcctcaggcagctcgacaaactcgccaaggtt
ggcgaagcggaggtgcgcacactcctcatcgagcacgcgggtgcgagcgaagaacaggcc
gacggctgccttgctttcgcgcggatcaaggcgacccatgaggaccttgccgagaaagtc
aacgcgcttggcgtctcaagcgaggcgattccgcacgcactcgaggagctgagcttcgtg
atccgcaccgtcaacgcctcggtgccgggcgcttgcatcgccgatctctcgatcgcgcga
ggtctcgactactacacgggaacggtgttcgaaaccttcgtagagggccacgaggatctt
ggttcgatctgctcgggcggccggtacgacacgctcgcaaccgacaaccgccactcctac
ccgggcgtcggtctttcgattggtctttctcgtcttgtctcgcggctcgtgacgcggtcg
ctcgcgacctccacgagggcggtgccgaccgtcgcactcgtcgcggtagcggacgaggag
caccgtgaggcgagcgtcgacgtcgcccgtgtgctgcgttcgcgaggtatttctgctgaa
gtcgcaccgagtgctgcgaagttcggcaagcagatcaagtacgcggatcgccgcggtatt
cccttcgtgttcttcccctccgaggatggcagaggagaagtcaaagacattcgcagcggc
gagcagaccccagccgacgcgcacacgtggcagccaccacaagacgacatgaccgcgcgt
gtggtggcgaccacctcgaccaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

Download RDF

DBGET integrated database retrieval system