KEGG   Dokdonella koreensis: I596_23
Entry
I596_23           CDS       T04377                                 
Name
(GenBank) Exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
dko  Dokdonella koreensis
Pathway
dko03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    I596_23
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dko03400]
    I596_23
Enzymes [BR:dko01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     I596_23
DNA repair and recombination proteins [BR:dko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     I596_23
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ANB16063
UniProt: A0A167G1W8
Position
complement(36880..37650)
AA seq 256 aa
MRIATWNVNSLNVRLPHVELWCASAQPDVLALQETKLEDAKFPRAAIEALGYHVAFSGQK
TYNGVALMARQPILDVVTDIPGLDDPQRRVLVATVGELRVANLYVVNGQAVGSEKYAYKL
DWLAKVSAFLAGELRNDPRLVVMGDFNIAPDDRDVHDPVAWHEQILCSTPEREALRRLLD
LGLLDSFRLFDADPGHYSWWDYRQAGFRRNLGLRIDLVLAGERLKARARAATIDRIPRAW
ERPSDHAPALLELADD
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcgaatcgccacctggaacgtcaattcactgaacgtccgcctgccgcacgtcgagctg
tggtgcgcatcggcgcagccggacgtgctcgcgctgcaggaaaccaagctggaggacgcc
aagttcccgcgcgccgcgatcgaggcgctcggctaccacgtcgcgttctccggccagaag
acctacaacggcgtcgccctgatggcgcgccagccgatcctggacgtcgtcaccgacatc
ccgggattggacgatccgcagcggcgcgtgctggtcgcgaccgtcggcgagctcagggtc
gccaacctgtacgtcgtcaacggccaggccgtcggcagcgagaagtacgcctacaagctc
gattggctggccaaggtctccgcattcctcgcgggcgagctgcgcaacgatccgcggctg
gtcgtcatgggcgatttcaacatcgccccggacgatcgcgacgtgcacgacccggtggcc
tggcatgaacagatcctgtgctcgacgccggagcgcgaagcgctgcgccggctgctggac
ctgggcttgctcgacagtttccgcctgttcgacgccgatccgggccactacagctggtgg
gactaccggcaggccggcttccgacgcaacctcggcctgcgcatcgacctggtgctggcc
ggcgaacgcttgaaggcgcgcgcgcgcgccgccactatcgaccgcatcccccgcgcctgg
gaacgcccgtccgaccacgcgcccgcccttctggaacttgccgatgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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