KEGG   Delphinapterus leucas (beluga whale): 111181450
Entry
111181450         CDS       T05885                                 
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
dle  Delphinapterus leucas (beluga whale)
Pathway
dle03013  Nucleocytoplasmic transport
dle03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111181450 (THOC1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    111181450 (THOC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dle03019]
    111181450 (THOC1)
   03041 Spliceosome [BR:dle03041]
    111181450 (THOC1)
Messenger RNA biogenesis [BR:dle03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111181450 (THOC1)
Spliceosome [BR:dle03041]
 Complex C
  Other components
   EJC/TREX
    111181450 (THOC1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111181450 (THOC1)
SSDB
Motif
Pfam: efThoc1 Death HsdM_N
Other DBs
NCBI-GeneID: 111181450
NCBI-ProteinID: XP_022442505
UniProt: A0A2Y9P8X1
Position
Unknown
AA seq 657 aa
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVVE
EEIINHSSCENVLAVISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHMEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGDQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLISALNKSGLSDLAESLTNDSETNS
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgtctcctacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaaatct
accagagaggccctgaacaacaaaaatatcaagcccttgttgaataccttcagccagttg
cctggaagtgaaaatgaaaaaaaatgtacccttgaccaagcttttagaggtgttgtagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctgttatttctcttgctatt
gggggagttactgaaggtatttgtacagcatctacaccttttgtattgttgggagatgtt
ttggattgccttcctttggatcagtgtgacacgatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttacgaagattatcaaaatcccagaatacagtcttctgtggacgaattcag
ctctttttggccagacttttccctttatctgagaagtcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcacattgggtcaa
aagcacatggaggacagagaagaaggaatggatgtggaagaaggtgaaatgggggatgat
gaagctccaacaacttgctccattccaattgattacaacctgtaccgaaaattttggtca
cttcaggattactttaggaaccctgtgcaatgctatgagaaaatttcatggaaaactttt
ctcaagtattctgaagaagttcttgctgtttttaagagttataaattagatgatactcag
gcctcaaggaaaaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaag
tttttaacaagtgaaaagctgatggatttacaactgagcgacagtaactttcgtcgacac
atcctgttgcagtatctcattttattccagtatctcaaggggcaggtcaaatttaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagataccaagccgacaagagtagtacggaagagaacggctccagag
gacttcctagggaaaggaccgaacaaaaaaattctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagggaatatatg
ccaactttggaggagttctttgaagaagccattgaacaggcagaccctgaaaatatggtt
gaaaatgaatacaaggctgtgaacaattctaattatggttggagagccctgagactatta
gcacggagaagccctcacttctttcagccaaccaaccagcagtttaaaagtttgccagaa
tatctcgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggggaccaaatagaggtatttgccaacaaa
ctgggtgaacaatggaagattctggccccctacttggaaatgaaagactcagaaattaga
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctgctagtcgcctgg
caggatcaggagggagtgcacgcgacacctgagaacctgatcagtgcactcaacaagtca
gggttaagtgaccttgcagaaagtctaactaatgacagtgagacaaatagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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