KEGG   Dehalogenimonas lykanthroporepellens: Dehly_0465
Entry
Dehly_0465        CDS       T01264                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
dly  Dehalogenimonas lykanthroporepellens
Pathway
dly03030  DNA replication
dly03430  Mismatch repair
dly03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dehly_0465
   03430 Mismatch repair
    Dehly_0465
   03440 Homologous recombination
    Dehly_0465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dly03032]
    Dehly_0465
   03400 DNA repair and recombination proteins [BR:dly03400]
    Dehly_0465
Enzymes [BR:dly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Dehly_0465
DNA replication proteins [BR:dly03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Dehly_0465
DNA repair and recombination proteins [BR:dly03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Dehly_0465
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_30 AAA_22 AAA_19 AAA_5 DNA_pol3_delta Rad17 AAA_16 Glyco_tranf_2_5 AAA_18 DnaX_C AAA_24 AAA_6
Other DBs
NCBI-ProteinID: ADJ25781
Position
complement(434954..436624)
AA seq 556 aa
MTFQVFFRKWRPQRLAEVVGQKPITDTLLSALQQNRVAQAYLFCGPRGTGKTSTGRILAK
AVNCLNNEGSGEPCNECSMCRAITNGSAMDIIEIDAASNNSVDDIRVLNDRVNYSPAEAR
YKVYIIDEFHMLSTSASNALLKTLEEPPPRVIFILATTELHKILPTIMSRCQRFDFRRLT
TDDITDKLAEIATSEGVDIERDGLVLLARAAGGSLRDAENLLQQTATASQGKISLRQVQD
SLGLSGDDRAARLVRAVAAADTVEAIRILAGVADDGVNLKQFNREVVEVLRQALLIKTGS
TGSLTLSAEELDNARHAAADAGMEYLLRALKAFTALVGNADMHSTLAMEMAIIETTLTAR
TPPVTGAPEQQKSVTASARTPVRPTPAPATPPPPVKPVPDSKPPETPAPRPVATPVDTPS
AAPETSATEVAPVVESASNAPVANLEELKEAWPQILSRVPKDLRRSPALAIMRSAGVEPI
SFENGKLTLSFKFPIHMNKINEPENKRITVKILSACLGVPCEVECIHAPAANHLVKEAQR
RGAEIINVEEEWTSHR
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgacatttcaagtattcttccgtaaatggcggccgcaacggctggccgaagtggtcggc
cagaagccgattaccgataccctgctgtcggcacttcagcaaaaccgggtagcccaggcc
tatcttttctgcgggccgcgcggcaccggtaaaacatccaccggccgcattctggccaag
gcggtcaactgtctcaacaatgaaggctccggcgaaccctgcaatgaatgttccatgtgc
cgggccatcaccaacggctccgccatggatatcattgagatcgatgccgcctccaataac
agcgttgacgacatccgggtactcaatgaccgggtgaattactccccggcggaagcccgt
tataaagtctatatcatcgatgaattccatatgctgtccaccagtgcctccaatgccctg
ctcaagacgctggaagaaccaccgcctcgggtcatcttcatcctggctaccaccgaactg
cacaagatattgccaaccatcatgtcccgctgtcagcgcttcgacttccgccgcctgacc
accgatgacatcaccgataagctggccgaaatcgctacttctgagggtgtagatatcgaa
cgtgacggcctggtactgctggcccgcgccgccggaggctccctccgggacgctgaaaac
ctgctccagcagaccgccaccgccagtcagggcaaaatcagcctgcgtcaggtgcaggac
agcctggggttgagcggtgacgaccgggcggcgcgcctggttcgggcggtagccgccgcc
gataccgtggaagctatacggattctggctggcgtggctgacgacggtgttaatctcaag
cagttcaaccgcgaagtggtcgaagtcttgcgccaggccctcctgataaaaacgggctct
accggttcccttaccctgtcagcggaagaactggacaatgcccgccatgccgccgccgac
gccggcatggaatatcttctacgggcccttaaagcctttaccgcgctggtcggcaatgcc
gatatgcactcgaccctggccatggaaatggctatcatcgaaaccacgctgaccgcccgg
acgcccccggtcaccggcgccccggaacagcaaaagtcagtgacggcttccgcccggaca
ccggttcggccgaccccggccccggctacgcccccgccgccggtgaaaccggttccggat
tcgaagccgccggaaacaccggctccccgtcctgtggcaactccagtggacacgccttct
gccgcacctgaaacttcggcaacggaagtcgcgcccgtcgtcgagtcggccagtaacgcg
ccggtcgccaatctggaagaacttaaagaagcctggccgcagatactgtcgcgggtgccg
aaagatctccgccgttcaccggcgctggccatcatgcgctctgccggcgtcgaacccatc
agcttcgagaacggcaagctcactctgtctttcaagttcccgattcatatgaacaagata
aacgagccggaaaacaagcggattacggtcaagatcctgtcggcctgcctgggcgtgccg
tgcgaggtcgagtgtattcacgcccctgccgccaatcacctggtcaaagaggcacagcgt
cgcggtgccgagataataaacgtggaggaagaatggacttctcacaggtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (65)   

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