KEGG   Solidesulfovibrio magneticus: DMR_31630
Entry
DMR_31630         CDS       T00917                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dma  Solidesulfovibrio magneticus
Brite
KEGG Orthology (KO) [BR:dma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dma03016]
    DMR_31630 (truB)
Enzymes [BR:dma01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DMR_31630 (truB)
Transfer RNA biogenesis [BR:dma03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DMR_31630 (truB)
 Prokaryotic type
    DMR_31630 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 DKCLD
Other DBs
NCBI-ProteinID: BAH76654
NITE: DMR_31630
UniProt: C4XJA4
Position
3581463..3582431
AA seq 322 aa
MAENKYPLPQLHGVLVLDKPSGPTSTRCLTAIKRLGQKKIGHAGTLDPLAAGVLVVLLGE
ATKIAPYVMEGEKTYLGALRLGVATDTYDCEGTVTTEAPWDHVSASALAEAIASWTELTS
QEVPPYSAAKHQGRPLYELARKGLAAPVKVKDISVFDAQAESVDLPSATFRVRVSAGVYI
RSLVHSLGMRLGCGAIMTALTREESRPFALTQAHSLDAVLADPQSLPERIIPLDKALPHW
PTTTLGPAAADDVRRGIRVPVTGDFAPGTHALLVDEARLPLALARAEATGGRLRWAIVRG
LFGDPQPARRGGNDAPATNDTP
NT seq 969 nt   +upstreamnt  +downstreamnt
gtggctgagaacaagtacccgctgccgcagctccacggcgtgctggtgctggacaagccc
tccggccccacctccacccggtgcctgacggccataaagcgcctgggtcagaaaaagatc
ggccatgccggcaccctggatcccttggcggccggcgtgctggtggtccttctcggcgag
gccaccaagatcgccccctacgtcatggagggcgagaagacctatctgggcgcgctgcgc
ctgggcgtcgccaccgacacctacgactgcgaagggaccgtgacgaccgaggcgccctgg
gatcatgtttctgcctcggccctggccgaggccatcgcttcctggacggaactgaccagc
caggaagtgccgccctactcggcggccaaacaccagggacggcccctgtacgaactagcc
cgcaagggtctggccgccccggtgaaagtcaaggatatttccgttttcgacgcgcaggcc
gaatcggtcgacctgccgtcggcaaccttccgggtacgggtatccgccggcgtctacata
cgctccctggtccacagcctggggatgcgactgggatgcggcgcgatcatgacagccctg
acccgggaggagagccgccccttcgccttgacgcaggcgcacagcctcgacgctgtcctg
gccgacccgcagtcgctgcccgagcggatcattcccctcgacaaagccctgccccattgg
cccacgacaacgcttggccctgctgcggcggatgacgtccgccggggcatccgtgtcccg
gtcacgggggatttcgcccccgggacccacgccctgctcgtggacgaagcgcgcctgccc
ctggctctggccagggccgaggcgacgggcggccggcttaggtgggccatcgtgcgcggt
cttttcggagacccgcaaccggcccggcgcggcggcaatgacgcccccgccaccaatgac
accccctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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