KEGG   Solidesulfovibrio magneticus: DMR_33320
Entry
DMR_33320         CDS       T00917                                 
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
dma  Solidesulfovibrio magneticus
Pathway
dma00300  Lysine biosynthesis
dma00550  Peptidoglycan biosynthesis
dma01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dma00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    DMR_33320 (murE)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    DMR_33320 (murE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:dma01011]
    DMR_33320 (murE)
Enzymes [BR:dma01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     DMR_33320 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:dma01011]
 Precursor biosynthesis
  Amino acid ligase
   DMR_33320 (murE)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase PHAX_RNA-bd
Other DBs
NCBI-ProteinID: BAH76823
NITE: DMR_33320
UniProt: C4XK74
Position
complement(3740195..3741661)
AA seq 488 aa
MKMTLHDNAAFQGLLDAVRQGGVDVAADSRRATSGGVFVAMAGSRDDGARYVADALEKGV
AFVVAAPGHDLPAGTTARLVAVDDPQAALGALAAARFGTETMAMPVVAVTGTNGKTTVSY
LIERLAQAAGHTVGVLGTVAYRWPGVVHDATLTTPDCLAIHENLAAMARSGCTLAVMEAS
SHALDQDRLAGLSFAAAAFTNLTQDHLDYHKDMAVYFEAKAKLFRRYLARAETAVFNFDD
AWGLKLLHEFPQAIGYGLTVPPTGFGRLLSGHVQHHGREGQDILAAYGDDSYAVATPLPG
RHNAQNVLAACGVALALGWPAETFAALADCHGAPGRLERIPNPSGRAVFVDYAHTPDALE
NVLSAAREFTAGRLFVVFGCGGNRDRAKRPLMGAAVARLADVAVLTSDNPRHEDPLAIIE
DVKPGLKKARRAILEPDRRRAIELALSEMRPEDVLVIAGKGHETYQQIGDVKYPFSDAVV
VRELTGCA
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgaagatgacgctgcacgacaacgctgcattccagggcctccttgacgccgtgcgccag
ggaggcgtcgacgttgccgccgactcccgcagggcgacctctggcggagtcttcgtggcc
atggccgggtcccgggacgacggcgcgcgctacgtggccgatgcactggaaaaaggcgtc
gccttcgtcgtggccgcaccgggccatgacctgccggccgggaccacggcccggctcgtg
gccgtggacgatccccaggccgccctgggcgcgttggccgccgctcgcttcggcacggaa
accatggccatgcctgtggtcgccgtcaccggcaccaacggcaagaccacggtgagctat
ttgatcgaacgtctggcccaggccgccgggcatacggtcggggtccttggcaccgtggcc
taccgctggcccggcgtggtccacgacgccacgctcaccaccccggactgcctggccatc
cacgaaaatctcgccgccatggcccgctccggctgcaccctggccgtcatggaggcttct
tcccacgctctggatcaggaccggctggccggcctgtcctttgccgctgccgccttcacc
aatctcacccaggaccacctggactaccacaaggacatggccgtttatttcgaggccaag
gccaagctcttcaggcgctatctggcccgagccgagacggcggtattcaatttcgacgac
gcctggggcctgaaactcctgcatgagttcccccaggccatcggctacggcctcaccgtg
ccgcccacgggctttggccggctgctgtccggccatgtccagcaccatggccgcgagggc
caggacatcctggccgcctacggcgacgacagctacgccgtggccacgcccttgcccggc
cgccacaacgcccaaaacgtcctggccgcctgcggcgtggccctggctctgggctggccg
gccgagaccttcgccgccctggccgactgccatggcgcgccgggacggctggagcgcatc
cccaatccttccggccgcgcggttttcgtggactacgcccacacccccgacgccctggaa
aacgtgctgtccgccgcccgggagttcaccgccggccggctgttcgtggtctttggctgc
ggcggcaaccgcgaccgggccaagcgtccgctcatgggcgcggccgtggcccggctggcc
gacgtggccgtgctcacctccgacaatccgcgccacgaagatcccctggccatcatcgag
gacgtcaagccgggccttaaaaaagctcgccgggccatcctcgaacccgaccgtcgccgg
gctatcgagctggccctttcggaaatgcggcccgaggacgtgctggtcatcgccggcaag
ggacacgaaacctatcagcagattggcgacgttaaatatccgttttccgatgccgtcgtc
gtgagggagctgaccggatgcgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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