KEGG T00030: Dmel

Drosophila melanogaster (fruit fly): Dmel_CG12225

Entry

Dmel_CG12225      CDS       T00030

Symbol

Spt6

Name

(RefSeq) Spt6, isoform B

K11292

transcription elongation factor SPT6

Organism

dme Drosophila melanogaster (fruit fly)

Brite

KEGG Orthology (KO) [BR:dme00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dme03021]
    Dmel_CG12225 (Spt6)
   03036 Chromosome and associated proteins [BR:dme03036]
    Dmel_CG12225 (Spt6)
Transcription machinery [BR:dme03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     Dmel_CG12225 (Spt6)
Chromosome and associated proteins [BR:dme03036]
Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     Dmel_CG12225 (Spt6)

SSDB

Motif

Pfam:

SH2_2 YqgF HHH_7 HTH_44 SPT6_acidic S1 Tex_central_region Spt6_S1 HHH_9 HHH_3 Tex_YqgF OB_RRP5_4th Tex_N S1_RRP5

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

FlyBase:

UniProt:

Position

X:6267797..6274984

AA seq 1831 aa
MAEFLDSEAEESEEEEELDVNERKRLKKLKAAVSDSSEEEEDDEERLREELKDLIDDNPI
EEDDGSGYDSDGVGSGKKRKKHEDDDLDDRLEDDDYDLIEENLGVKVERRKRFKRLRRIH
DNESDGEEQHVDEGLVREQIAEQLFDENDESIGHRSERSHREADDYDDVDTESDADDFIV
DDNGRPIAEKKKKRRPIFTDASLQEGQDIFGVDFDYDDFSKYEEDDYEDDSEGDEYDEDL
GVGDDTRVKKKKALKKKVVKKTIFDIYEPSELKRGHFTDMDNEIRKTDIPERMQLREVPV
TPVPEGSDELDLEAEWIYKYAFCKHTVSEQEKPESREKMRKPPTTVNKIKQTLEFIRNQQ
LEVPFIAFYRKEYVKPELNIDDLWKVYYYDGIWCQLNERKRKLKVLFEKMRQFQLDTLCA
DTDQPVPDDVRLILDSDFERLADVQSMEELKDVHMYFLLNYSHELPRMQAEQRRKAIQER
REAKARRQAAAAENGDDAAEAIVVPEPEDDDDPELIDYQLKQASNSSPYAVFRKAGICGF
AKHFGLTPEQYAENLRDNYQRNEITQESIGPTELAKQYLSPRFMTTDEVIHAAKYVVARQ
LAQEPLLRKTMREVYFDRARINIRPTKNGMVLIDENSPVYSMKYVAKKPVSDLFGDQFIK
LMMAEEEKLLEITFLEEFEGNACANGTPGDYVEESKALYQLDQFAKHVQEWNKLRAECVQ
LALQKWVIPDLIKELRSTLHEEAQQFVLRSCTGKLYKWLKVAPYKPQLPPDFGYEEWSTL
RGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRLPNILKRKNSYNLEEKAQKLADLRKL
SDFIKMKKPHIVVIGAESRDAQNIQADIKEILHELETSEQFPPIEVEIIDNELAKIYANS
KKGESDFKEYPPLLKQAASLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLE
QLSLQFINRTSEVGLDINLMVQNSRTINLLQYICGLGPRKGQALLKLLKQSNQRLENRTQ
LVTVCHLGPRVFINCSGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEY
DDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYR
TPYTKPSAEELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDSANPVRLDSNESW
QCPFCHKDDFPELSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPEER
VRVSQMIHVRIIKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDYVTEEQDNRKVSDA
KARALKRKIYARRVIAHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVAD
DIFQHIDVREEGKENDFSLGRSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKPN
MVTGDENERDVMEKLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVMP
EGYRFRGQIFDTVNSLLRWFKEHWLDPTATPASASASNLTPLHLMRPPPTISSSSQTSLG
PQAPYSVTGSVTGGTPRSGISSAVGGGGSSAYSITQSITGYGTSGSSAPGAGVSSSHYGS
SSTPSFGAINTPYTPSGQTPFMTPYTPHASQTPRYGHNVPSPSSQSSSSQRHHYGSSSGT
GSTPRYHDMGGGGGGGVGGGGGSNAYSMQPHHQQRAKENLDWQLANDAWARRRPQQHQSH
QSYHAQQQHHHSQQQPHMGMSMNMGITMSLGRGTGGGGGGGYGSTPVNDYSTGGGHNRGM
SSKASVRSTPRTNASPHSMNLGDATPLYDEN

NT seq 5496 nt +upstreamnt +downstreamnt
atggccgaatttctggactccgaggccgaggaatcggaggaggaggaagaattggacgtc
aacgagcgcaagagactcaagaaactgaaggcggccgtctccgatagtagcgaagaagaa
gaagacgacgaggaacggctgcgcgaagagctcaaagatctgatcgacgacaatcccatc
gaggaggacgatggcagtggttacgattccgatggcgtcggcagcggcaagaagcgcaaa
aagcacgaggacgacgatctggacgatcgactggaggacgacgactacgatcttatcgag
gagaatctgggcgtcaaagtcgagagacggaagcggttcaagcgtctgcgtcgcatccac
gacaacgaaagcgatggcgaggagcagcacgtggacgagggtctggtgcgtgagcagatt
gccgagcagttgttcgacgagaacgatgagagcattggtcatcgcagcgagcgcagtcac
agggaggcggacgactacgacgacgtggatacggagtcggacgcagatgacttcattgtg
gacgataatgggcgtcccatagccgagaagaagaagaaacggcgccccatctttacagac
gcatcacttcaagagggtcaggacatctttggcgtagacttcgactatgacgacttctca
aagtacgaggaagacgactacgaagatgactcggaaggagatgagtacgatgaggatctg
ggcgtcggcgatgatacgcgcgtcaagaagaagaaagcgctcaaaaagaaggtggtcaag
aagacaatcttcgacatatacgagcccagcgagctcaagcgtggtcatttcaccgatatg
gacaacgagattcgcaagacagacatcccagaaagaatgcagctgcgagaggtgcccgta
accccggtgcccgagggatcagacgagctggacctcgaggctgaatggatctacaaatat
gccttctgcaagcacactgtttcggaacaggaaaagccggagagccgcgagaaaatgcgc
aaaccaccgacaaccgttaacaagattaagcagacgctagaatttatacgcaaccagcag
ttggaggtgccctttatagccttctatcgcaaggagtatgtgaagccagagcttaatatc
gacgatctctggaaggtttactactacgatgggatctggtgtcagctaaacgagcgaaag
cgcaagctaaaggtgcttttcgaaaagatgcgtcagttccagctggacacgctatgcgcc
gacacagatcaacccgtaccggatgatgttcgcctcatcctggacagcgatttcgagcgc
ctcgccgacgtacagtcgatggaggagctaaaggacgtgcacatgtactttctgctgaac
tattcgcatgagctgccccgcatgcaggcggagcagcgacgaaaagctatacaggagcgt
cgcgaggccaaggcgcgtcgccaggcagccgccgctgagaacggtgatgatgcggccgag
gcgatagttgtaccagagccggaagacgatgacgatcccgagctgatcgattaccaacta
aagcaggcgtccaacagcagtccctatgcggtattccgcaaggcgggcatctgcggcttt
gccaaacactttggtctcacgccggagcagtatgccgaaaatctgcgcgacaattaccag
cgcaatgagatcacccaggaaagcatcggtcccacagagctggccaagcaatatttgtcg
ccgcgcttcatgaccacggatgaggttatccatgccgcaaaatacgttgtggcccgacag
ctggcacaagagcctctgctgcgcaagaccatgcgtgaggtgtatttcgacagagctagg
attaacatacggcccaccaagaatggcatggtgctgatcgatgagaattcgccggtgtat
tcgatgaagtacgtggccaagaagccggtaagcgatctatttggcgatcaattcataaag
ctaatgatggccgaggaggagaagctgctggagataacgttcctcgaggagttcgagggc
aatgcgtgtgccaacggaacacccggtgactatgtggaagagtccaaggccctgtaccag
ctggatcagtttgccaagcacgtgcaggagtggaataagctgcgggcggaatgcgtacag
ctggcgctgcagaagtgggtcattccggatctgatcaaggagctgcgctcaactctgcac
gaggaggctcagcaatttgtgctgcgttcctgcacgggtaagctgtataagtggctaaag
gtggcaccctataaaccgcaactgccccccgactttggctacgaggagtggagcacgctg
aggggcatacgggtgctgggtctggcctacgatcccgatcactcagtggccgctttctgt
gcggtgactaccgtggagggcgacatctccgactacctgcgactgccgaacattctgaag
cgcaagaattcttacaaccttgaggagaaggcccagaagttggccgaccttcgaaagctg
agtgactttatcaaaatgaagaagccacacattgttgtcatcggagcggaatcgcgcgat
gcccagaacatccaggcagacattaaggagattctgcatgaactcgagacctccgaacaa
tttccgcccatcgaggtggagataatcgacaacgagctggccaagatctatgccaactcg
aagaagggcgagtctgactttaaggagtatcctcctctgctgaagcaggctgcttcgctg
gcccgcaagatgcaggatccgctagtggaatactcacagctgtgtgatgcggacgacgag
attctctgcctgcgctaccatccgctacaggagcgtgtgccgcgcgaacagctgctggag
cagctcagcctgcagtttatcaatcgaacgagcgaggtgggtctggacattaacctgatg
gtgcagaactcacggaccatcaacctgctgcagtacatctgtggcttgggtccgcgcaag
ggtcaggctttacttaaacttcttaagcagagcaaccagcggttggagaaccgcacccag
ctggtcaccgtgtgtcatctggggcccagggtctttatcaactgcagcggtttcattaag
atcgatacctcatcgctgggcgacagcacagaggcgtatgtcgaggtgctggacgggtcg
cgtgtgcatccagaaacgtacgagtgggccagaaagatggccatcgatgccatggagtac
gacgacgaggagaccaatccggccggtgcccttgaggaaattctcgagtcgccagagcgc
cttaaggatctcgatctggacgcattcgctgtggaactggagcgccagggattcggcagc
aagagcataaccttgtacgacataaggaacgagttgagctgcctgtacaaggactaccgc
actccgtacacaaagcccagtgcggaggagctcttcgatatgctgaccaaggagacgccc
gactcgttttatgtgggcaagtgcgtcacggccatggtcaccggtttcacctaccgtcgg
ccgcagggcgatcagctagacagcgcaaatccggtgcgtctagattccaacgaaagctgg
cagtgccccttctgccacaaggacgacttcccagagctgtccgaggtgtggaatcacttt
gacgcgaacgcgtgccctggccagccatctggtgtgcgtgtgcgtctggagaacggcctg
cctggctttatacacatcaagaacttgtccgatagacaggttcgcaatcccgaagaacgt
gtgcgcgtctcacagatgattcatgttcgcatcattaagatagacattgaccggttctca
gtcgaatgctcttcgaggaccgctgatcttaaggatgtgaacaatgagtggcggccgcgt
cgcgacaactactatgattatgtgactgaggagcaggacaatcggaaagtgagcgatgcc
aaggccagggctctgaagcgcaaaatttacgcgcgtcgcgtaatcgcccatcccagcttc
ttcaacaagtcgtacgcggaggtggtggccatgctagcggaggccgatcagggcgaggtg
gccctgcgtccgagcagcaagtccaaggaccatctgacagccacctggaaggtggccgac
gacatcttccagcacatcgatgtgcgcgaggagggtaaagagaacgatttcagcctgggc
agaagtctgtggatcggcaccgaggagttcgaggatctggacgagatcatcgcccgccac
atcatgccgatggccttggctgcccgcgaactgatacagtacaagtactacaagccaaac
atggtgaccggcgatgaaaatgaacgggatgtcatggaaaagttgctgcgcgaggagaag
gcaaatgatccgaagaagatacactacttttttacggcctcacgcgccatgccgggcaag
ttcctgctgtcctatctgcccaagacgaaggtgcgtcacgagtatgtgacggtcatgccg
gagggctatcgtttccgtggccagattttcgatacggttaacagtctgctgcgttggttt
aaggaacactggctggatccaacggccacgccggccagcgcctcggcgtccaacttaacg
ccactgcacttgatgcgtccgccgccgacgatctcgtcgtcatcccagacctccttgggc
ccccaggcgccctacagcgtcactggcagcgtgactggtggaacgccgcgcagtggcatc
agcagtgccgtcggcggtggcggttccagcgcctactccattacgcaatccatcactggc
tacggcacgtcgggcagttctgctccaggggctggagtatcttcctcccactatggcagc
tcatcgacgccgtcgtttggcgccatcaatacgccatacacgcccagtggacagactccg
ttcatgacgccctacacgccgcatgcctcacagacgcctcgctatggtcacaatgtgccc
agtcccagctcgcaatcatcgagcagtcagaggcatcactacggcagcagttccggaacg
ggcagcacgcccaggtatcacgatatgggaggaggaggcggtggcggcgttggtggtggt
ggtggttccaatgcctacagcatgcagccgcatcaccagcaacgtgccaaagagaacctc
gactggcagctggccaacgatgcctgggcaagacgcagaccgcagcagcatcagtcacat
cagtcgtatcacgcccagcagcagcatcatcactcgcagcagcaaccccatatgggcatg
agcatgaacatgggcattacaatgtcactgggacgtggcaccggtggcggcggaggaggt
ggctatggatcgacgcctgtcaatgattacagcaccggaggcggtcataatcggggtatg
tcctcgaaggcgtctgtgcgcagtacgccgcgcaccaacgcctcgccgcactccatgaat
ctgggcgatgccacgcccctctacgacgagaactag

All links

Gene (123)   
   RefGene (119)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (144)   

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