KEGG   Drosophila melanogaster (fruit fly): Dmel_CG31184
Entry
Dmel_CG31184      CDS       T00030                                 
Symbol
LSm3
Name
(RefSeq) uncharacterized protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03018  RNA degradation
dme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dmel_CG31184 (LSm3)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dmel_CG31184 (LSm3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG31184 (LSm3)
   03041 Spliceosome [BR:dme03041]
    Dmel_CG31184 (LSm3)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dmel_CG31184 (LSm3)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Dmel_CG31184 (LSm3)
Spliceosome [BR:dme03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Dmel_CG31184 (LSm3)
 Complex C
  U2 snRNP components
    Dmel_CG31184 (LSm3)
SSDB
Motif
Pfam: LSM DUF150_C TIG_SUH HydF_dimer Glutaredoxin DNA_pol3_tau_5
Other DBs
NCBI-GeneID: 42842
NCBI-ProteinID: NP_001163707
FlyBase: FBgn0051184
UniProt: Q8IMX8
Position
3R
AA seq 103 aa
MADETEQLSQVILPVKEPLDLIRLSLDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEE
TVTTVEIDEETYEEVYKTAKRTIPMLFVRGDGVILVSPPMRVG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggccgacgaaacagagcagctcagtcaggtgattttgccggtaaaggagcctttggat
ctcatccgattgagtttagatgagaaggtgtacgtaaagatgcgcaacgagcgggaactg
cgaggacgtcttcacgcctttgatcagcatttgaacatggtgctcggcgatgcggaggag
acggtgaccactgtggagatcgacgaggagacctatgaggaggtgtacaagaccgccaag
cgcactattcccatgctattcgttagaggcgatggagtcatcctggtttcgccacccatg
cgggtgggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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