KEGG   Drosophila melanogaster (fruit fly): Dmel_CG3178
Entry
Dmel_CG3178       CDS       T00030                                 
Symbol
Rrp1
Name
(RefSeq) recombination repair protein 1, isoform A
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Dmel_CG3178 (Rrp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dme03400]
    Dmel_CG3178 (Rrp1)
Enzymes [BR:dme01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Dmel_CG3178 (Rrp1)
DNA repair and recombination proteins [BR:dme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Dmel_CG3178 (Rrp1)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-GeneID: 33500
NCBI-ProteinID: NP_476841
FlyBase: FBgn0004584
UniProt: P27864
Position
2L
AA seq 679 aa
MPRVKAVKKQAEALASEPTDPTPNANGNGVDENADSAAEELKVPAKGKPRARKATKTAVS
AENSEEVEPQKAPTAAARGKKKQPKDTDENGQMEVVAKPKGRAKKATAEAEPEPKVDLPA
GKATKPRAKKEPTPAPDEVTSSPPKGRAKAEKPTNAQAKGRKRKELPAEANGGAEEAAEP
PKQRARKEAVPTLKEQAEPGTISKEKVQKAETAAKRARGTKRLADSEIAAALDEPEVDEV
PPKAASKRAKKGKMVEPSPETVGDFQSVQEEVESPPKTAAAPKKRAKKTTNGETAVELEP
KTKAKPTKQRAKKEGKEPAPGKKQKKSADKENGVVEEEAKPSTETKPAKGRKKAPVKAED
VEDIEEAAEESKPARGRKKAAAKAEEPDVDEESGSKTTKKAKKAETKTTVTLDKDAFALP
ADKEFNLKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYH
PYWLCMPGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYEKFYLINVYVPNSGRK
LVNLEPRMRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERD
KMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVSERFVPKVVEHE
IRSQCLGSDHCPITIFFNI
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgccgcgtgtcaaggccgtgaaaaaacaagcagaggcgttggcatctgaacccactgac
cccactccaaatgccaatgggaatggagtcgacgaaaacgcagactctgccgctgaggaa
ctcaaggtgccggcaaaaggaaagccgcgcgcgaggaaagccaccaagacggctgtatct
gcggaaaactccgaggaagtcgagccacaaaaggcgcccactgcagccgcgcgtggcaag
aagaagcagccgaaggatacagacgaaaacggccagatggaggtggtggccaagccgaag
ggacgcgccaagaaggcaactgcagaagcagaaccagaacccaaagtcgatctaccagct
ggaaaggcaactaagccacgtgccaaaaaagagcccactcctgctcctgacgaagtgacg
tcttcaccgcctaagggacgcgctaaggctgagaaaccaacgaatgcccaggccaaagga
cggaagcgaaaggagctgccggcagaagcaaatggaggggccgaggaagcagcagagccg
ccgaaacaacgggcaagaaaggaagcagtaccaacgttaaaggagcaagctgaaccaggg
acaataagcaaagagaaggtgcagaaagctgagacagctgccaagcgggcacgcggaacc
aagcgtttggcagattctgagatcgcagctgctctcgatgagccggaagtggatgaggtg
ccgccaaaggctgctagcaagcgagcaaagaagggaaagatggttgagccatcgcccgag
actgtaggagattttcaatcagtacaagaagaagtggaatcgcctccaaaaactgcagct
gcacccaagaaacgcgccaagaaaacaaccaatggtgagactgcggtagaacttgagcca
aagaccaaggcaaagcccactaaacagcgcgctaagaaggaaggcaaggagccagcaccc
gggaagaagcagaagaaatccgccgataaggaaaacggtgtagttgaagaagaagccaag
ccctctactgaaaccaagccagctaaaggacggaaaaaggctccagtcaaggcagaggat
gtcgaagatattgaggaggcagcagaggaaagtaaaccagctcgaggccgaaaaaaggcg
gctgcgaaggctgaagaacccgatgtcgatgaggagagtggatcgaaaaccaccaaaaaa
gccaagaaggccgagaccaaaaccactgtaacattggataaagacgcttttgccttgcca
gcagacaaagaattcaacttgaaaatctgcagctggaacgtggccggtctgagggcctgg
ttgaaaaaggatggtctgcagttgattgacctcgaggaaccagacattttctgcctgcag
gaaaccaagtgcgcaaacgatcagttgccagaggaggtgacccgactgccgggatatcat
ccctattggctgtgcatgccaggaggctatgccggcgtcgctatttacagcaagataatg
cccatacacgtggaatacggcattggcaatgaggagttcgacgatgtcgggcgcatgatt
acggctgagtacgaaaagttttacttgatcaatgtgtacgtgccgaattcaggccgaaag
ctggttaacttggagccccgcatgcgctgggaaaagctcttccaggcgtacgtgaagaaa
ctggacgctctaaaaccggtggtcatctgcggcgacatgaacgtttcccatatgcccatt
gatctggaaaacccgaagaataacaccaagaatgccggcttcacccaggaggagcgtgac
aaaatgacagagctgctgggcctcggctttgtggacacgtttaggcatttatatcccgat
cgcaagggcgcctacaccttctggacatacatggccaatgcgcgagcacgcaacgttgga
tggcgtctggactattgtctcgtctcggagagattcgtgcccaaggtggtggagcacgag
atacgcagccaatgccttggaagcgaccactgcccgatcacaatattcttcaatatataa

  All links  
Gene (28)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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