KEGG   Drosophila melanogaster (fruit fly): Dmel_CG32139
Entry
Dmel_CG32139      CDS       T00030                                 
Symbol
Sox21b
Name
(RefSeq) Sox21b, isoform B
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
dme  Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:dme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dme03000]
    Dmel_CG32139 (Sox21b)
Transcription factors [BR:dme03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    Dmel_CG32139 (Sox21b)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 39569
NCBI-ProteinID: NP_001261828
FlyBase: FBgn0042630
UniProt: Q9VUD3
Position
3L:complement(14112405..14131324)
AA seq 571 aa
MMERLSTHLSLTGLSLAHPLQTHLGSGGGTHHLGQLAAAVHQQQQQQQQSDQGLGHSHHL
HGQQLSLNHQHHHPHQSPQHQQQHQHHPCSSNSSNGSPNGSTGLGLHPHSALHLAHHHSQ
LHQHHPAGQQQQHSQPPVSSSSTSHHSQSQALSHQTHSNGSSQLGGGSASGAGSVAGGAA
NSHHSAPASSSVMAAAAAAHLHHNSQASPISNLHQNMGSLMNSGSSASDVFFSLMIQNTT
KRQNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPGYFAPGPTA
AAYHLGSHLGQTSTPTTTQATLSGQMDKFALERSSYLSNSSQASAYSAYLDPSVLTKAYF
DSKMYQDRAANYAFDISKIYGAQQHAAAHHQQQQQQQQQQQQQQQQLLLSGGGGSGGGGS
ASSHNNNSSSGLDDRDATPQLEAVESKPHLHSPSDVGLDYAQYAQQYGGQLAAAAGGAVG
GGAAGAAGGSAGGGSGGATAADFRRPLTVIF
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgatggaacgtctgtccacgcacctgtcgctcaccggcctatcgctagctcatcccctg
caaactcacctgggttccggcggcggaacgcaccaccttggtcaactggcggcggcggtg
catcagcagcaacagcagcagcaacaatctgaccagggtctcggccactcgcaccacctg
cacggccagcagttgtcgctgaaccaccagcaccaccatccccaccagtcgccacagcat
cagcagcagcatcagcaccacccgtgcagtagcaacagcagcaacggatcccccaacggc
tccaccggcctgggcctgcatccccactcggcgctccacctggcacaccatcactcgcag
ctgcatcagcaccacccggcgggtcagcagcagcagcacagccaaccgccggtttcctcc
tcctcgacctcgcaccacagccagtcgcaggcgctgagccatcagacgcacagcaacggc
agctcccagctgggcggtggttcggccagtggtgcgggatcagtggccggcggtgcagcc
aacagccaccacagtgctccagcctccagcagcgtgatggcggccgcagcagccgcccac
ctgcatcacaactcgcaggcatcgcccatcagcaatctgcaccaaaacatgggcagtctc
atgaacagcggaagcagcgcgagcgatgtcttctttagtctgatgatccagaacacaaca
aagcgccaaaacgaggagcacataaaacgtccaatgaacgctttcatggtctggtcgaga
cttcagcggcgcaagatagctcaggataatcctaagatgcacaattcagagatatccaaa
aggctgggtgccgagtggaagttgctcaccgaggaggagaagcgtccgttcatcgatgag
gccaaacgattgagggccatgcacatgaaggaacatccggactataaatacagaccgcga
cgaaagccaaaagctctgagacgcgatggctatccttatccaatgccatatccatctgtg
cccgtggaggcgttaagagcgggcataacgcccggttactttgcgcccggtcccacagcg
gctgcctatcacctgggcagccatctcggccagacatcgacgccaaccacgacgcaggcc
accctctccggtcagatggacaagttcgccctggagcgcagctcgtatctgagcaactcc
tcgcaggcgagtgcctacagcgcctacttggaccccagtgtgctgaccaaggcgtatttc
gactccaagatgtaccaggatcgggcggccaactatgccttcgacatatccaagatttat
ggtgcccagcaacatgcagcagcccaccaccagcagcaacagcagcagcagcagcaacag
cagcagcagcagcaacagttgctgctcagcggtggtgggggcagcggcgggggcggcagt
gccagctcgcacaacaacaacagcagcagtgggctggatgaccgcgatgccacaccccaa
ttggaggcggttgagtccaagccgcatctgcattcgcccagtgatgtgggtctggactac
gcccaatatgcccagcaatatggcggtcaattggcagcggcagcgggtggtgcagtgggt
ggtggggccgcaggtgcagccgggggctcggcgggcggtgggagtggtggcgccaccgcc
gcggactttcgacgaccgctaacggtgatcttctga

  All links  
Gene (97)   
   RefGene (93)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (107)   

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