KEGG T00030: Dmel

Drosophila melanogaster (fruit fly): Dmel_CG3978

Entry

Dmel_CG3978       CDS       T00030

Symbol

pnr

Name

(RefSeq) pannier, isoform A

K09183

GATA-binding protein 4

Organism

dme Drosophila melanogaster (fruit fly)

Brite

KEGG Orthology (KO) [BR:dme00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dme03000]
    Dmel_CG3978 (pnr)
Transcription factors [BR:dme03000]
Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    Dmel_CG3978 (pnr)

SSDB

Motif

Pfam:

GATA DUF7573 Zn_Ribbon_TF Spt20_SEP DUF7133 Zn_ribbon_8 Zn_Ribbon_Prim VPS13_N

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

FlyBase:

UniProt:

Position

3R:16026079..16041796

AA seq 540 aa
MGILLSDGDSTSDQQSTRDYPHFSGDYQNVTLSAASASTSASASATHVAAVKMYHSSAVA
AYTDLAAAGSAASAGVGVGVSGYHQQAVNAPVYVPSNRQYNHVAAHFGSAAAQNAWTTEG
FGSAHAQFYSPNAAVMMGSWRSAYDPSGFQRSSPYESAMDFQFGEGRECVNCGAISTPLW
RRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLCCTNCGTRTTTLWRRN
NDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSAVGAGTGSGTGSTLEA
IKECKEEHDLKPSLSLERHSLSKLHTDMKSGTSSSSTLMGHHSAQQQQQQQQQQQQQQQQ
QQQQSAHQQCFPLYGQTTTQQQHQQHGHSMTSSSGQAHLSARHLHGAAGTQLYTPGSSSG
GGSASAYTSHSAETPALSNGTPSPHYQHHHHLGGTHGHHVTAAAAHHHFHAAAAVAAYGV
KTEASATNYDYVNNCYFGGTFGALGGAATTTAMAGGAASELAGYHHQHNVIQAAKLMATS

NT seq 1623 nt +upstreamnt +downstreamnt
atgggcatcttactgagtgatggcgattccacatcggatcagcagtcgactcgcgactat
ccccacttcagcggcgactatcagaacgtgacgctgtcggctgcctctgcatccacatcc
gcatccgcttctgccacccacgtcgccgccgtcaagatgtaccacagtagcgccgttgcg
gcatacacggacctggctgccgccggtagtgccgcaagcgccggagtcggagtcggggtg
tccggctatcaccagcaggcggtaaacgctcccgtttacgtgccatccaaccgacagtac
aaccacgtggccgctcattttggaagcgctgcggcgcagaatgcctggaccacggaagga
ttcggatcggcgcatgcacagttctactcgccaaacgccgctgtgatgatgggctcgtgg
cgcagtgcctacgatccgtcgggcttccaaagatcctcgccctacgagagcgctatggac
ttccagtttggcgagggacgcgagtgcgtcaattgcggtgccatatcgactccgttgtgg
cgacgggatggaaccggacactatctgtgcaacgcctgcggactgtaccataagatgaac
ggaatgaaccggccgctgatcaagcctagcaagcgcctggtgagtgcaactgccactcgg
aggatgggcttgtgctgcaccaactgcggcactcggaccaccacactttggaggcgcaac
aacgatggcgaacccgtgtgcaatgcctgcggactgtactacaagttgcacggtgttaac
agaccactggccatgaggaaggatggcattcagaccaggaaacgaaagcccaagaaaacg
ggaagtggttcggcggtgggagcgggcactggatccggaacaggctccactttggaggcc
atcaaggagtgcaaggaggagcatgatctcaaaccctcgctcagcctggagcgccatagc
ctcagtaagctgcacacggatatgaagagcggcaccagcagtagtagcaccttgatggga
catcacagcgcgcagcagcagcagcagcagcaacagcaacaacaacagcaacagcagcag
cagcagcagcaatcggcacaccaacaatgctttcccctttacggacagacgacgacgcaa
cagcagcaccagcaacatggccacagcatgacatcatcctctggacaggcacatctgagt
gcccgccaccttcacggagcggcaggaacgcagctctacacgcccggcagcagttccggc
ggaggcagtgcgtctgcctacacatcgcacagtgcggagacgccggccctgagcaacgga
actccctcgccccattaccagcaccaccaccacctcggcggaacccatggacaccatgtg
acggcagcggcggcacatcatcatttccatgccgctgccgctgtggccgcctacggcgta
aagacagaggcgagtgccaccaactacgactatgtgaacaactgctactttgggggcacc
ttcggtgcgctgggaggagctgcaaccacaaccgccatggctggcggagcggccagtgaa
ctggctggctaccatcaccagcacaacgtcatccaggcagccaaactgatggccacctcg
taa

All links

Gene (39)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (58)   

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