KEGG   Desulfosporosinus meridiei: Desmer_1672
Entry
Desmer_1672       CDS       T02207                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
dmi  Desulfosporosinus meridiei
Pathway
dmi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dmi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Desmer_1672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmi03019]
    Desmer_1672
   03009 Ribosome biogenesis [BR:dmi03009]
    Desmer_1672
Enzymes [BR:dmi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Desmer_1672
Messenger RNA biogenesis [BR:dmi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Desmer_1672
Ribosome biogenesis [BR:dmi03009]
 Prokaryotic type
  rRNA helicases
   Desmer_1672
SSDB
Motif
Pfam: DEAD Helicase_C ResIII SLFN-g3_helicase AAA_19 SMC_N
Other DBs
NCBI-ProteinID: AFQ43646
UniProt: J7IY69
Position
1751294..1752454
AA seq 386 aa
MNTFNKLGIDEALVTALKQQGIVEPTVIQEQAIPYILDAKDVLGQSETGTGKTLAFLLPI
IQRIDTLKKETQAMILTPTHELAIQIQREIETLVKDSGIAVTSAAIIGNVNISRQIEKLK
QKPHIIVGSSGRILELIQKKKIVAQTVKTIVLDEADRLLDENNSAIVKGVIKTTLSRTQL
LLFSATLSPQTQQKASTLLKTPEVIRVTETIMIAPTVEHMYFLAEQRDKIEALRKLIRII
IPTRGLIFINKSEEIEKTVLTLKYHGLEAEGIFGGAKKAERKKAMDDFRSGKSSLLVASD
IAARGLDIKGITHIFNLDLSEDPQLYLHRVGRTGRAGNKGIAISIVNPQEVQVLRKLESA
FGIQISPKEMSQGKIVNVRKKLQRKV
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaatacctttaataaacttggaatcgacgaagctttagtaactgctcttaaacaacaa
gggattgttgagccaactgtaattcaagagcaagcaataccctatatcttagatgcgaaa
gatgtattgggccagtcggaaacaggaaccggtaaaaccttagcttttctgcttccgatt
attcaaaggatcgatactctcaagaaagaaactcaagcaatgattcttactccaacccat
gaactagctatccaaattcagcgtgagatagagactctagtaaaagactctggtattgca
gttacttccgctgcaatcatcggaaacgtaaatatttctcggcaaattgaaaaattaaag
caaaaaccccatataatagtgggttccagtggaagaattcttgagctaattcaaaagaaa
aagatagtagctcaaactgttaaaacaattgtgcttgatgaagctgatcgtctacttgat
gagaataacagcgctattgttaaaggggtaataaagacgaccctaagcagaacgcagcta
ttgttgttttcggcgaccttatccccccagacccaacagaaggcgtcgacactattaaaa
actcctgaagtcattcgagtgaccgaaacaatcatgattgctcccaccgttgaacatatg
tattttttggcagaacagagagataaaattgaagccctgagaaaattaattagaataatc
atccctacgcgagggctgatatttattaataaaagtgaagagattgaaaaaacggtctta
acactaaaatatcacggtttagaagcagagggcatttttggaggggctaaaaaggctgaa
cgaaaaaaggcgatggatgatttcaggagtggaaaaagctccttgttagtggcttcagat
atagctgccagaggattagacataaaggggatcacccatatttttaacttagatttgtcg
gaagatcctcagctttatcttcatagagtcggcagaacaggcagggcaggtaataagggg
attgctatttcaatcgtcaatccacaggaggttcaggttttaagaaagttagaaagcgct
tttggaattcagattagccctaaagaaatgtcccaaggaaagatcgttaacgtaagaaaa
aagttacagaggaaagtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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