KEGG   Desulfosporosinus meridiei: Desmer_3221
Entry
Desmer_3221       CDS       T02207                                 
Name
(GenBank) MutS domain V
  KO
K07456  DNA mismatch repair protein MutS2
Organism
dmi  Desulfosporosinus meridiei
Pathway
dmi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Desmer_3221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dmi03400]
    Desmer_3221
DNA repair and recombination proteins [BR:dmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     Desmer_3221
SSDB
Motif
Pfam: MutS_V T2SSE
Other DBs
NCBI-ProteinID: AFQ45101
UniProt: J7J295
Position
complement(3370560..3372518)
AA seq 652 aa
MNANNTLEFNIILETLAEHALSQKAREKLLSLKPFLNERECKAKMQETTEARKILEGIGT
PPLASMKELDKILDLTEKGSMLAPEQLTGICGFISSCKRTKKYLNKAEAFNTGIAFYGHS
LSPLDMLFGEIERCIRNEGVDDGASSVLRDIRRKIENTKSAVKIKLEDILRSKKEWFTDG
YVTIRNGRFVLPVKKGYKNQLSGTVIDTSSTGSTCFIEPAAVRKLQEELSLLQIDEDNEI
RKILYTLTVLVEEHINELRINKDCMETLDFIFAKAKLSIEMKAVPVSITTERKIIIKQGR
HPLLKPDLCIPLDFEILGGLGDDAINGVVITGPNTGGKTVALKTIGLLSIMAQSGLHVPV
SPGSVFSMHNSVFCDIGDGQSISENLSTFSSHIQNIVAILQEVSRESLVLLDELGSGTDP
AEGMGLAIAILAELNQRGCLFVATTHYPEIKDFAKNTKGLMNARMEFDRENLQPLYRLQI
GEAGESCALYIAKRLGFPGHMLKRAQMEAYGGRSSKLRDRPTIMFDEDNTNDEDNTKKSD
NVSHNKIQKEIPKEKTPSRSESFNIGDCVRVYPQKSLGIVYRRTNEKGELGVQIKDKKQL
INHKRLKLFLPASELYPEDYDFSIIFDTVAIRKARHQLAKGHDVIIEYEEHD
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgaatgccaacaatacattggaatttaatataatacttgaaactttggctgagcatgca
ctttcccaaaaggcaagggaaaaattgctctccctaaagccatttttaaatgagcgagag
tgcaaagccaaaatgcaggaaacaacagaagcacgcaaaattttagagggtataggcacg
ccacccctggcctcaatgaaagagttggataaaattctggatttaacagagaaaggctca
atgctggcccctgaacagctcacaggtatttgtggttttatttcttcctgcaaaagaacg
aagaaatatcttaacaaggctgaagcctttaatacgggtatagctttttatggtcattct
ttaagtccactggatatgctttttggggaaattgagcgctgtatcagaaatgaaggggtt
gacgatggtgcttcttcagtccttcgtgacattcgcagaaaaatagaaaacacaaaatct
gccgttaaaataaagctagaggacattctgcgcagcaaaaaggaatggttcacagatgga
tatgtcaccatccgtaatggacggtttgtcttgccggttaaaaaaggctataaaaatcag
ttgagcggaacagtcattgatacttcaagcactggcagcacctgttttattgagccagca
gcagtcagaaagctgcaggaggaattgtcccttttacaaattgatgaagataatgagatt
agaaaaatattatacacccttaccgtacttgttgaagagcatattaatgagttgagaatc
aacaaggactgcatggaaaccttggactttatatttgccaaggcaaagctgtccatcgag
atgaaagcagttcctgtgtccattacaacagaacgaaaaatcatcataaagcagggaaga
caccctttattgaagccagacctctgtattcctcttgattttgagattctagggggcctg
ggtgatgatgctattaacggggttgtaattaccgggccgaatacagggggaaaaaccgtt
gccttaaaaaccattggcttactgtcaattatggctcaaagtggacttcacgttcctgtg
tccccaggcagtgtattttctatgcataacagtgttttctgcgatatcggtgatgggcaa
agcatttctgagaatctatctactttttcctcccatatccaaaatattgtagctattctc
caggaggtatcaagggaaagtctggttttgcttgatgagttaggctccggtacagaccct
gctgagggaatgggactagcaattgcaattttagcggaattaaatcagcgaggctgtctt
tttgtggccaccacccattacccggaaatcaaggattttgccaagaacacaaaaggactt
atgaatgcccgtatggagtttgatcgggaaaacttacagcccctatacagactacaaatt
ggcgaggccggggaaagctgtgccttatacattgccaaaagattaggctttcccgggcat
atgctgaagcgagcacaaatggaagcctatggcggcagatcctctaagttaagagacaga
ccaactattatgtttgatgaggataacactaatgatgaggacaacaccaaaaaatcagac
aatgtttcccacaacaaaattcaaaaagaaattccaaaggaaaaaacaccctcacggagc
gaaagctttaatataggtgactgtgtaagagtttacccccaaaaatctctggggattgtt
tacaggagaaccaatgaaaaaggcgagcttggcgtgcagattaaagataagaagcagctg
attaatcacaagcggttaaagcttttccttcccgccagcgaactctatccggaggattat
gatttttcgattattttcgatacggtggcaatccgcaaggccagacaccagttagcaaaa
gggcacgatgtaataatagaatatgaggagcatgattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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