KEGG   Desulfococcus multivorans: Dmul_12550
Entry
Dmul_12550        CDS       T04568                                 
Symbol
rho
Name
(GenBank) Rho: transcription termination factor
  KO
K03628  transcription termination factor Rho
Organism
dml  Desulfococcus multivorans
Pathway
dml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dmul_12550 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dml03021]
    Dmul_12550 (rho)
   03019 Messenger RNA biogenesis [BR:dml03019]
    Dmul_12550 (rho)
Transcription machinery [BR:dml03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Dmul_12550 (rho)
Messenger RNA biogenesis [BR:dml03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Dmul_12550 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA ATPase_2 Spore_III_AA AAA_22
Other DBs
NCBI-ProteinID: AOY58030
Position
1410612..1411859
AA seq 415 aa
MNITELKEKKINELTQMARDFKIEGAAGMRKQELIFALLQAQIEKNGLIYGEGTLEILPD
GFGFLRAPNYNYLPGPDDIYVSPSQIRRFNLRTGDTVSGQIRQPKESERYFALLKVEAIN
YEDPEIAREKILFDNLTPLYPNRKINLEHDPENYSTRIMDLMTPIGFGQRGLIVSPPRSG
KTMLLQFIANSITANHKEIDLFVLLIDERPEEVTDMQRSVKGEVISSTFDEPAERHVQVA
EMVIDKAKRLVEHKKNVVILLDSITRLARAYNSVVPPSGKILSGGVDSNALQRPKRFFGA
ARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMELQLDRRLADKRLFPAIDIKKS
GTRKEELLMDKDTLNRVWILRKLLSSLNPVDSLEFLLEKMQGTGNNKEFLEAMNT
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaatatcactgaactcaaggaaaaaaaaattaacgagctgacgcagatggccagagac
ttcaagatcgaaggggccgccgggatgcgaaagcaggagctgatcttcgctttattgcag
gcgcagattgaaaaaaacggcttgatttacggagagggcaccctggagattctgccggac
ggttttggtttcctgagggcgccaaactacaactatctcccggggcccgacgatatatat
gtctctccctcccagattcgccgcttcaatctgcggacgggagacacggtgtccggacag
attcgtcagcccaaggaatccgaacgctactttgcgctattgaaggtcgaagccatcaac
tatgaagatcccgagatcgcgcgggaaaagattctttttgacaacctgaccccactttat
cccaaccgcaagatcaatctcgagcatgatcccgaaaactattccacccggattatggac
ctgatgacgcccatcgggttcggtcagcgcggacttatcgtctctccgccaagatccggc
aagaccatgctgcttcagttcatcgccaacagcatcaccgccaaccacaaggaaatcgat
ttgtttgtccttctgatcgacgagcgacccgaagaagtgaccgatatgcagcggtccgtc
aagggcgaggtgatcagttcgacctttgacgaaccggcggagcggcatgtccaggtggcc
gagatggtcatcgacaaggccaaacggctggtggagcacaagaaaaatgtcgtcatcctt
ctggacagcatcacgcgcctggcgagggcttacaattccgtagttccccccagcggcaag
atcctttccggcggcgtcgactccaatgccctgcagcggcctaaacgattctttggcgcg
gcccgaaatatcgaggaaggtggaagcttgaccatcatcgccacggcgcttatcgatacg
gggagccgaatggacgaggtgatcttcgaagaattcaaaggcaccggaaacatggagctt
caattggaccggcgcttggccgacaagcgattgttcccggccatcgacatcaaaaagtcg
ggtacccgaaaggaggaactccttatggataaggacaccttgaaccgtgtctggattctg
cggaaattgttgtcatccctgaatcctgtggacagcctcgaatttttacttgaaaaaatg
cagggtacgggtaataataaagagtttctagaggcaatgaatacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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